Analysis of interatomic Contacts of Structural Units in PDB entry:
6FWV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FWV entry

There are 2 chains in PDB entry 6FWV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	LYS 526
B	ALA 2	LYS 525

There are 11 helices in PDB entry 6FWV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	70	Right-handed alpha
Helix 2	AA2	A	75	80	Right-handed alpha
Helix 3	AA3	A	83	99	Right-handed alpha
Helix 4	AA4	A	103	105	Right-handed 310
Helix 5	AA5	A	111	128	Right-handed alpha
Helix 6	AA6	B	60	70	Right-handed alpha
Helix 7	AA7	B	75	80	Right-handed alpha
Helix 8	AA8	B	83	99	Right-handed alpha
Helix 9	AA9	B	103	105	Right-handed 310
Helix 10	AB1	B	111	128	Right-handed alpha
Helix 11	AB2	B	475	477	Right-handed 310

There are 22 sheets in PDB entry 6FWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	9	first strand
Strand 2	A	29	32	anti-parallel
Strand 3	A	37	40	anti-parallel
Strand 4	A	237	248	anti-parallel
Strand 5	A	210	228	anti-parallel
Strand 6	A	252	256	anti-parallel
Strand 7	A	144	145	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	58	first strand
Strand 2	A	210	228	anti-parallel
Strand 3	A	166	174	anti-parallel
Strand 4	A	192	194	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	A	16	18	anti-parallel
Strand 3	A	107	108	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	139	first strand
Strand 2	A	159	162	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	152	154	anti-parallel
Strand 3	A	200	204	anti-parallel
Strand 4	A	181	183	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	304	first strand
Strand 2	A	259	267	anti-parallel
Strand 3	A	335	341	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	291	first strand
Strand 2	A	278	283	anti-parallel
Strand 3	A	306	314	anti-parallel
Strand 4	A	326	330	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	394	first strand
Strand 2	A	346	355	anti-parallel
Strand 3	A	426	435	parallel
Strand 4	A	409	410	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	382	first strand
Strand 2	A	367	372	anti-parallel
Strand 3	A	396	404	anti-parallel
Strand 4	A	415	420	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	485	first strand
Strand 2	A	437	446	anti-parallel
Strand 3	A	516	524	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	468	473	first strand
Strand 2	A	458	462	anti-parallel
Strand 3	A	487	495	anti-parallel
Strand 4	A	507	511	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	4	9	anti-parallel
Strand 3	B	29	32	anti-parallel
Strand 4	B	37	40	anti-parallel
Strand 5	B	237	248	anti-parallel
Strand 6	B	210	228	anti-parallel
Strand 7	B	252	256	anti-parallel
Strand 8	B	144	145	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	58	first strand
Strand 2	B	210	228	anti-parallel
Strand 3	B	166	174	anti-parallel
Strand 4	B	192	194	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	25	first strand
Strand 2	B	16	18	anti-parallel
Strand 3	B	107	108	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	139	first strand
Strand 2	B	159	162	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	149	first strand
Strand 2	B	152	154	anti-parallel
Strand 3	B	200	204	anti-parallel
Strand 4	B	181	183	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	304	first strand
Strand 2	B	259	267	anti-parallel
Strand 3	B	335	341	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	291	first strand
Strand 2	B	278	283	anti-parallel
Strand 3	B	306	314	anti-parallel
Strand 4	B	326	330	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	394	first strand
Strand 2	B	346	355	anti-parallel
Strand 3	B	426	435	parallel
Strand 4	B	409	410	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	382	first strand
Strand 2	B	367	372	anti-parallel
Strand 3	B	396	404	anti-parallel
Strand 4	B	415	420	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	485	first strand
Strand 2	B	437	446	anti-parallel
Strand 3	B	516	524	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	468	473	first strand
Strand 2	B	458	463	anti-parallel
Strand 3	B	487	495	anti-parallel
Strand 4	B	507	511	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FWV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FWV