Analysis of interatomic Contacts of Structural Units in PDB entry:
6FXJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FXJ entry

There are 3 chains in PDB entry 6FXJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 251
B	GLU 3	ILE 251
C	GLU 3	PRO 136

There are 56 helices in PDB entry 6FXJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	27	Right-handed alpha
Helix 2	AA2	A	29	53	Right-handed alpha
Helix 3	AA3	A	78	91	Right-handed alpha
Helix 4	AA4	A	92	96	Right-handed 310
Helix 5	AA5	A	123	126	Right-handed 310
Helix 6	AA6	A	127	135	Right-handed alpha
Helix 7	AA7	A	160	162	Right-handed 310
Helix 8	AA8	A	163	180	Right-handed alpha
Helix 9	AA9	A	209	221	Right-handed alpha
Helix 10	AB1	A	222	227	Right-handed alpha
Helix 11	AB2	A	241	243	Right-handed 310
Helix 12	AB3	A	244	249	Right-handed alpha
Helix 13	AB4	B	21	28	Right-handed alpha
Helix 14	AB5	B	29	53	Right-handed alpha
Helix 15	AB6	B	78	92	Right-handed alpha
Helix 16	AB7	B	93	96	Right-handed 310
Helix 17	AB8	B	127	135	Right-handed alpha
Helix 18	AB9	B	160	162	Right-handed 310
Helix 19	AC1	B	163	180	Right-handed alpha
Helix 20	AC2	B	209	221	Right-handed alpha
Helix 21	AC3	B	222	228	Right-handed alpha
Helix 22	AC4	B	241	249	Right-handed alpha
Helix 23	AC5	C	21	28	Right-handed alpha
Helix 24	AC6	C	29	53	Right-handed alpha
Helix 25	AC7	C	78	91	Right-handed alpha
Helix 26	AC8	C	92	96	Right-handed 310
Helix 27	AC9	C	127	135	Right-handed alpha
Helix 28	AD1	C	160	162	Right-handed 310
Helix 29	AD2	C	163	181	Right-handed alpha
Helix 30	AD3	C	209	221	Right-handed alpha
Helix 31	AD4	C	222	227	Right-handed alpha
Helix 32	AD5	C	241	243	Right-handed 310
Helix 33	AD6	C	244	250	Right-handed alpha
Helix 34	AD7	D	21	26	Right-handed alpha
Helix 35	AD8	D	29	53	Right-handed alpha
Helix 36	AD9	D	78	92	Right-handed alpha
Helix 37	AE1	D	93	96	Right-handed 310
Helix 38	AE2	D	123	126	Right-handed 310
Helix 39	AE3	D	127	135	Right-handed alpha
Helix 40	AE4	D	160	162	Right-handed 310
Helix 41	AE5	D	163	180	Right-handed alpha
Helix 42	AE6	D	208	221	Right-handed alpha
Helix 43	AE7	D	222	228	Right-handed alpha
Helix 44	AE8	D	241	243	Right-handed 310
Helix 45	AE9	D	244	249	Right-handed alpha
Helix 46	AF1	E	21	28	Right-handed alpha
Helix 47	AF2	E	29	53	Right-handed alpha
Helix 48	AF3	E	78	91	Right-handed alpha
Helix 49	AF4	E	92	96	Right-handed 310
Helix 50	AF5	E	127	135	Right-handed alpha
Helix 51	AF6	E	160	162	Right-handed 310
Helix 52	AF7	E	163	180	Right-handed alpha
Helix 53	AF8	E	209	221	Right-handed alpha
Helix 54	AF9	E	222	227	Right-handed alpha
Helix 55	AG1	E	241	243	Right-handed 310
Helix 56	AG2	E	244	250	Right-handed alpha

There are 10 sheets in PDB entry 6FXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	231	first strand
Strand 2	A	143	151	anti-parallel
Strand 3	A	235	239	anti-parallel
Strand 4	A	56	63	anti-parallel
Strand 5	A	70	76	anti-parallel
Strand 6	A	7	20	anti-parallel
Strand 7	A	98	111	anti-parallel
Strand 8	A	186	191	anti-parallel
Strand 9	A	200	206	anti-parallel
Strand 10	A	143	151	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	157	158	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	231	first strand
Strand 2	B	143	151	anti-parallel
Strand 3	B	235	239	anti-parallel
Strand 4	B	56	63	anti-parallel
Strand 5	B	70	76	anti-parallel
Strand 6	B	8	20	anti-parallel
Strand 7	B	98	110	anti-parallel
Strand 8	B	186	191	anti-parallel
Strand 9	B	200	206	anti-parallel
Strand 10	B	143	151	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	157	158	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	231	first strand
Strand 2	C	143	151	anti-parallel
Strand 3	C	235	239	anti-parallel
Strand 4	C	56	63	anti-parallel
Strand 5	C	70	76	anti-parallel
Strand 6	C	7	20	anti-parallel
Strand 7	C	98	111	anti-parallel
Strand 8	C	186	191	anti-parallel
Strand 9	C	200	206	anti-parallel
Strand 10	C	143	151	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	157	158	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	231	first strand
Strand 2	D	143	151	anti-parallel
Strand 3	D	235	239	anti-parallel
Strand 4	D	56	63	anti-parallel
Strand 5	D	70	76	anti-parallel
Strand 6	D	7	20	anti-parallel
Strand 7	D	98	111	anti-parallel
Strand 8	D	186	191	anti-parallel
Strand 9	D	200	206	anti-parallel
Strand 10	D	143	151	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	154	first strand
Strand 2	D	157	158	anti-parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	231	first strand
Strand 2	E	143	151	anti-parallel
Strand 3	E	235	239	anti-parallel
Strand 4	E	56	63	anti-parallel
Strand 5	E	70	76	anti-parallel
Strand 6	E	7	20	anti-parallel
Strand 7	E	98	111	anti-parallel
Strand 8	E	186	191	anti-parallel
Strand 9	E	200	206	anti-parallel
Strand 10	E	143	151	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	153	154	first strand
Strand 2	E	157	158	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FXJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FXJ