Analysis of interatomic Contacts of Structural Units in PDB entry:
6FYC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FYC entry

There are 2 chains in PDB entry 6FYC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5SER 462
B
 GLN 5SER 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6FYC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
29 34Right-handed alpha
Helix 3
AA3
A
53 68Right-handed alpha
Helix 4
AA4
A
116 126Right-handed alpha
Helix 5
AA5
A
140 148Right-handed alpha
Helix 6
AA6
A
153 158Right-handed alpha
Helix 7
AA7
A
159 162Right-handed 310
Helix 8
AA8
A
184 192Right-handed alpha
Helix 9
AA9
A
194 199Right-handed 310
Helix 10
AB1
A
225 239Right-handed alpha
Helix 11
AB2
A
278 290Right-handed alpha
Helix 12
AB3
A
304 312Right-handed alpha
Helix 13
AB4
A
333 345Right-handed alpha
Helix 14
AB5
A
360 365Right-handed alpha
Helix 15
AB6
A
366 371Right-handed 310
Helix 16
AB7
A
390 392Right-handed 310
Helix 17
AB8
A
393 409Right-handed alpha
Helix 18
AB9
A
416 420Right-handed 310
Helix 19
AC1
A
424 426Right-handed 310
Helix 20
AC2
A
427 433Right-handed alpha
Helix 21
AC3
A
433 448Right-handed alpha
Helix 22
AC4
B
7 18Right-handed alpha
Helix 23
AC5
B
29 34Right-handed alpha
Helix 24
AC6
B
53 68Right-handed alpha
Helix 25
AC7
B
116 126Right-handed alpha
Helix 26
AC8
B
140 148Right-handed alpha
Helix 27
AC9
B
153 158Right-handed alpha
Helix 28
AD1
B
159 162Right-handed 310
Helix 29
AD2
B
184 192Right-handed alpha
Helix 30
AD3
B
194 199Right-handed 310
Helix 31
AD4
B
225 239Right-handed alpha
Helix 32
AD5
B
260 264Right-handed 310
Helix 33
AD6
B
278 290Right-handed alpha
Helix 34
AD7
B
304 312Right-handed alpha
Helix 35
AD8
B
333 345Right-handed alpha
Helix 36
AD9
B
361 366Right-handed alpha
Helix 37
AE1
B
367 371Right-handed 310
Helix 38
AE2
B
390 392Right-handed 310
Helix 39
AE3
B
393 408Right-handed alpha
Helix 40
AE4
B
416 420Right-handed 310
Helix 41
AE5
B
424 426Right-handed 310
Helix 42
AE6
B
427 433Right-handed alpha
Helix 43
AE7
B
433 448Right-handed alpha
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There are 8 sheets in PDB entry 6FYC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
90 93parallel
Strand 4
A
71 74parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
108 112anti-parallel
Strand 3
A
200 207anti-parallel
Strand 4
A
164 170anti-parallel
Strand 5
A
176 180anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
209 210anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 303first strand
Strand 2
A
214 222anti-parallel
Strand 3
A
267 275anti-parallel
Strand 4
A
244 252anti-parallel
Strand 5
A
353 358anti-parallel
Strand 6
A
380 388anti-parallel
Strand 7
A
321 329anti-parallel
Strand 8
A
412 413anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 23first strand
Strand 2
B
47 50anti-parallel
Strand 3
B
90 93parallel
Strand 4
B
71 74parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
108 112anti-parallel
Strand 3
B
200 207anti-parallel
Strand 4
B
164 170anti-parallel
Strand 5
B
176 180anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 130first strand
Strand 2
B
209 210anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 303first strand
Strand 2
B
214 222anti-parallel
Strand 3
B
267 275anti-parallel
Strand 4
B
244 252anti-parallel
Strand 5
B
353 358anti-parallel
Strand 6
B
380 388anti-parallel
Strand 7
B
321 329anti-parallel
Strand 8
B
412 413anti-parallel
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