Analysis of interatomic Contacts of Structural Units in PDB entry:
6FYK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FYK entry

There are 3 chains in PDB entry 6FYK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 137GLU 485
B
 SER 137GLU 485
C
 SER 137GLU 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 6FYK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
198 219Right-handed alpha
Helix 2
AA2
A
249 257Right-handed alpha
Helix 3
AA3
A
263 284Right-handed alpha
Helix 4
AA4
A
292 294Right-handed 310
Helix 5
AA5
A
344 348Right-handed 310
Helix 6
AA6
A
349 354Right-handed alpha
Helix 7
AA7
A
360 377Right-handed alpha
Helix 8
AA8
A
385 398Right-handed alpha
Helix 9
AA9
A
401 408Right-handed alpha
Helix 10
AB1
A
410 412Right-handed 310
Helix 11
AB2
A
425 435Right-handed alpha
Helix 12
AB3
A
437 442Right-handed 310
Helix 13
AB4
A
446 460Right-handed alpha
Helix 14
AB5
A
463 467Right-handed 310
Helix 15
AB6
A
469 474Right-handed alpha
Helix 16
AB7
A
475 482Right-handed 310
Helix 17
AB8
B
198 219Right-handed alpha
Helix 18
AB9
B
249 257Right-handed alpha
Helix 19
AC1
B
263 283Right-handed alpha
Helix 20
AC2
B
292 294Right-handed 310
Helix 21
AC3
B
344 348Right-handed 310
Helix 22
AC4
B
349 354Right-handed alpha
Helix 23
AC5
B
360 377Right-handed alpha
Helix 24
AC6
B
385 398Right-handed alpha
Helix 25
AC7
B
401 408Right-handed alpha
Helix 26
AC8
B
410 412Right-handed 310
Helix 27
AC9
B
425 435Right-handed alpha
Helix 28
AD1
B
437 442Right-handed 310
Helix 29
AD2
B
446 460Right-handed alpha
Helix 30
AD3
B
463 467Right-handed 310
Helix 31
AD4
B
469 474Right-handed alpha
Helix 32
AD5
B
475 480Right-handed 310
Helix 33
AD6
C
198 219Right-handed alpha
Helix 34
AD7
C
249 257Right-handed alpha
Helix 35
AD8
C
263 283Right-handed alpha
Helix 36
AD9
C
292 294Right-handed 310
Helix 37
AE1
C
344 348Right-handed 310
Helix 38
AE2
C
349 354Right-handed alpha
Helix 39
AE3
C
360 377Right-handed alpha
Helix 40
AE4
C
385 398Right-handed alpha
Helix 41
AE5
C
401 408Right-handed alpha
Helix 42
AE6
C
410 412Right-handed 310
Helix 43
AE7
C
425 435Right-handed alpha
Helix 44
AE8
C
437 442Right-handed 310
Helix 45
AE9
C
446 460Right-handed alpha
Helix 46
AF1
C
469 475Right-handed alpha
Helix 47
AF2
C
476 480Right-handed 310
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There are 15 sheets in PDB entry 6FYK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
163 172anti-parallel
Strand 3
A
175 182anti-parallel
Strand 4
A
189 195anti-parallel
Strand 5
A
238 244anti-parallel
Strand 6
A
229 235anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
332 333anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
323 325anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 308first strand
Strand 2
A
313 318anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
418 419anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
163 171anti-parallel
Strand 3
B
175 182anti-parallel
Strand 4
B
189 195anti-parallel
Strand 5
B
238 244anti-parallel
Strand 6
B
229 235anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 287first strand
Strand 2
B
332 333anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 298first strand
Strand 2
B
323 325anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 308first strand
Strand 2
B
313 318anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
414 415first strand
Strand 2
B
418 419anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 159first strand
Strand 2
C
163 171anti-parallel
Strand 3
C
175 182anti-parallel
Strand 4
C
189 195anti-parallel
Strand 5
C
238 244anti-parallel
Strand 6
C
229 235anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
286 287first strand
Strand 2
C
332 333anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
296 298first strand
Strand 2
C
323 325anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
303 308first strand
Strand 2
C
313 318anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
414 415first strand
Strand 2
C
418 419anti-parallel
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