Analysis of interatomic Contacts of Structural Units in PDB entry:
6FYQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FYQ entry

There is 1 chain in PDB entry 6FYQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2GLY 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6FYQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
18 26Right-handed alpha
Helix 3
AA3
A
63 78Right-handed alpha
Helix 4
AA4
A
82 86Right-handed 310
Helix 5
AA5
A
88 102Right-handed alpha
Helix 6
AA6
A
114 133Right-handed alpha
Helix 7
AA7
A
152 159Right-handed alpha
Helix 8
AA8
A
161 167Right-handed 310
Helix 9
AA9
A
185 201Right-handed alpha
Helix 10
AB1
A
225 238Right-handed alpha
Helix 11
AB2
A
257 263Right-handed 310
Helix 12
AB3
A
272 277Right-handed 310
Helix 13
AB4
A
289 299Right-handed alpha
Helix 14
AB5
A
312 329Right-handed alpha
Helix 15
AB6
A
330 353Right-handed alpha
Helix 16
AB7
A
381 384Right-handed 310
Helix 17
AB8
A
385 397Right-handed alpha
Helix 18
AB9
A
421 443Right-handed alpha
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There are 3 sheets in PDB entry 6FYQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
38 41anti-parallel
Strand 3
A
46 49anti-parallel
Strand 4
A
399 400parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 112first strand
Strand 2
A
283 288anti-parallel
Strand 3
A
268 271anti-parallel
Strand 4
A
240 244parallel
Strand 5
A
205 210parallel
Strand 6
A
140 144parallel
Strand 7
A
175 178parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 361first strand
Strand 2
A
366 370anti-parallel
Strand 3
A
411 414anti-parallel
Strand 4
A
402 404anti-parallel
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