Analysis of interatomic Contacts of Structural Units in PDB entry:
6FYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FYZ entry

There are 3 chains in PDB entry 6FYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 650HIS 1034
B
 PRO 650GLN 1033
C
 GLY 646HIS 1034
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 6FYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
659 665Right-handed 310
Helix 2
AA2
A
679 692Right-handed alpha
Helix 3
AA3
A
694 698Right-handed 310
Helix 4
AA4
A
707 712Right-handed alpha
Helix 5
AA5
A
716 725Right-handed alpha
Helix 6
AA6
A
766 787Right-handed alpha
Helix 7
AA7
A
816 829Right-handed alpha
Helix 8
AA8
A
844 852Right-handed alpha
Helix 9
AA9
A
866 869Right-handed 310
Helix 10
AB1
A
882 886Right-handed 310
Helix 11
AB2
A
903 914Right-handed alpha
Helix 12
AB3
A
914 923Right-handed alpha
Helix 13
AB4
A
949 962Right-handed alpha
Helix 14
AB5
A
963 966Right-handed 310
Helix 15
AB6
A
977 993Right-handed alpha
Helix 16
AB7
A
1010 1025Right-handed alpha
Helix 17
AB8
A
1026 1027Right-handed 310
Helix 18
AB9
A
1028 1032Right-handed 310
Helix 19
AC1
B
659 665Right-handed 310
Helix 20
AC2
B
679 692Right-handed alpha
Helix 21
AC3
B
707 712Right-handed alpha
Helix 22
AC4
B
716 725Right-handed alpha
Helix 23
AC5
B
766 787Right-handed alpha
Helix 24
AC6
B
816 830Right-handed alpha
Helix 25
AC7
B
844 852Right-handed alpha
Helix 26
AC8
B
866 869Right-handed 310
Helix 27
AC9
B
882 886Right-handed 310
Helix 28
AD1
B
903 914Right-handed alpha
Helix 29
AD2
B
914 923Right-handed alpha
Helix 30
AD3
B
949 961Right-handed alpha
Helix 31
AD4
B
962 966Right-handed 310
Helix 32
AD5
B
977 994Right-handed alpha
Helix 33
AD6
B
1002 1007Right-handed alpha
Helix 34
AD7
B
1011 1026Right-handed alpha
Helix 35
AD8
B
1027 1028Right-handed 310
Helix 36
AD9
B
1029 1033Right-handed 310
Helix 37
AE1
C
659 665Right-handed 310
Helix 38
AE2
C
679 692Right-handed alpha
Helix 39
AE3
C
693 698Right-handed alpha
Helix 40
AE4
C
707 712Right-handed alpha
Helix 41
AE5
C
716 725Right-handed alpha
Helix 42
AE6
C
766 787Right-handed alpha
Helix 43
AE7
C
816 830Right-handed alpha
Helix 44
AE8
C
844 852Right-handed alpha
Helix 45
AE9
C
866 869Right-handed 310
Helix 46
AF1
C
882 886Right-handed 310
Helix 47
AF2
C
903 914Right-handed alpha
Helix 48
AF3
C
914 923Right-handed alpha
Helix 49
AF4
C
949 962Right-handed alpha
Helix 50
AF5
C
963 966Right-handed 310
Helix 51
AF6
C
977 993Right-handed alpha
Helix 52
AF7
C
1003 1007Right-handed 310
Helix 53
AF8
C
1010 1025Right-handed alpha
Helix 54
AF9
C
1026 1027Right-handed 310
Helix 55
AG1
C
1028 1032Right-handed 310
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There are 4 sheets in PDB entry 6FYZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
699 701first strand
Strand 2
A
654 657parallel
Strand 3
A
792 795parallel
Strand 4
A
968 972parallel
Strand 5
A
926 931parallel
Strand 6
A
834 838parallel
Strand 7
A
857 864parallel
Strand 8
A
889 894parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
699 701first strand
Strand 2
B
654 657parallel
Strand 3
B
792 795parallel
Strand 4
B
968 972parallel
Strand 5
B
926 931parallel
Strand 6
B
834 838parallel
Strand 7
B
857 864parallel
Strand 8
B
889 894parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
755 757first strand
Strand 2
B
760 761anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
699 701first strand
Strand 2
C
654 657parallel
Strand 3
C
792 795parallel
Strand 4
C
968 972parallel
Strand 5
C
926 931parallel
Strand 6
C
834 838parallel
Strand 7
C
857 864parallel
Strand 8
C
889 894parallel
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