Analysis of interatomic Contacts of Structural Units in PDB entry:
6FZI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FZI entry

There are 4 chains in PDB entry 6FZI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 331
B	MET 1	LYS 332
C	VAL 2	LYS 332
D	MET 1	LYS 332

There are 57 helices in PDB entry 6FZI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	22	Right-handed alpha
Helix 2	AA2	A	36	46	Right-handed alpha
Helix 3	AA3	A	78	82	Right-handed 310
Helix 4	AA4	A	83	88	Right-handed alpha
Helix 5	AA5	A	101	106	Right-handed alpha
Helix 6	AA6	A	106	111	Right-handed alpha
Helix 7	AA7	A	134	138	Right-handed 310
Helix 8	AA8	A	149	167	Right-handed alpha
Helix 9	AA9	A	200	204	Right-handed 310
Helix 10	AB1	A	213	219	Right-handed 310
Helix 11	AB2	A	220	224	Right-handed 310
Helix 12	AB3	A	253	264	Right-handed alpha
Helix 13	AB4	A	277	282	Right-handed 310
Helix 14	AB5	A	293	295	Right-handed 310
Helix 15	AB6	A	315	331	Right-handed alpha
Helix 16	AB7	B	10	22	Right-handed alpha
Helix 17	AB8	B	36	46	Right-handed alpha
Helix 18	AB9	B	78	82	Right-handed 310
Helix 19	AC1	B	101	106	Right-handed alpha
Helix 20	AC2	B	106	111	Right-handed alpha
Helix 21	AC3	B	134	138	Right-handed 310
Helix 22	AC4	B	149	167	Right-handed alpha
Helix 23	AC5	B	200	204	Right-handed 310
Helix 24	AC6	B	213	219	Right-handed 310
Helix 25	AC7	B	220	224	Right-handed 310
Helix 26	AC8	B	253	265	Right-handed alpha
Helix 27	AC9	B	277	282	Right-handed 310
Helix 28	AD1	B	293	295	Right-handed 310
Helix 29	AD2	B	315	331	Right-handed alpha
Helix 30	AD3	C	10	21	Right-handed alpha
Helix 31	AD4	C	36	46	Right-handed alpha
Helix 32	AD5	C	78	82	Right-handed 310
Helix 33	AD6	C	83	88	Right-handed alpha
Helix 34	AD7	C	101	111	Right-handed alpha
Helix 35	AD8	C	134	138	Right-handed 310
Helix 36	AD9	C	149	167	Right-handed alpha
Helix 37	AE1	C	200	204	Right-handed 310
Helix 38	AE2	C	213	219	Right-handed 310
Helix 39	AE3	C	220	224	Right-handed 310
Helix 40	AE4	C	253	264	Right-handed alpha
Helix 41	AE5	C	277	282	Right-handed 310
Helix 42	AE6	C	293	295	Right-handed 310
Helix 43	AE7	C	315	332	Right-handed alpha
Helix 44	AE8	D	10	21	Right-handed alpha
Helix 45	AE9	D	36	46	Right-handed alpha
Helix 46	AF1	D	78	82	Right-handed 310
Helix 47	AF2	D	83	88	Right-handed alpha
Helix 48	AF3	D	101	111	Right-handed alpha
Helix 49	AF4	D	134	138	Right-handed 310
Helix 50	AF5	D	149	167	Right-handed alpha
Helix 51	AF6	D	200	204	Right-handed 310
Helix 52	AF7	D	215	220	Right-handed alpha
Helix 53	AF8	D	221	224	Right-handed 310
Helix 54	AF9	D	253	265	Right-handed alpha
Helix 55	AG1	D	277	282	Right-handed 310
Helix 56	AG2	D	293	295	Right-handed 310
Helix 57	AG3	D	315	332	Right-handed alpha

There are 12 sheets in PDB entry 6FZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	60	first strand
Strand 2	A	63	66	anti-parallel
Strand 3	A	69	74	anti-parallel
Strand 4	A	26	32	parallel
Strand 5	A	2	7	parallel
Strand 6	A	91	94	parallel
Strand 7	A	115	118	parallel
Strand 8	A	144	146	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	209	first strand
Strand 2	A	227	234	anti-parallel
Strand 3	A	168	178	parallel
Strand 4	A	240	248	anti-parallel
Strand 5	A	303	312	anti-parallel
Strand 6	A	288	291	anti-parallel
Strand 7	A	269	272	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	209	first strand
Strand 2	A	227	234	anti-parallel
Strand 3	A	168	178	parallel
Strand 4	A	240	248	anti-parallel
Strand 5	A	303	312	anti-parallel
Strand 6	A	296	300	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	60	first strand
Strand 2	B	63	66	anti-parallel
Strand 3	B	69	74	anti-parallel
Strand 4	B	26	32	parallel
Strand 5	B	2	7	parallel
Strand 6	B	91	94	parallel
Strand 7	B	115	118	parallel
Strand 8	B	144	146	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	227	234	anti-parallel
Strand 3	B	168	178	parallel
Strand 4	B	240	248	anti-parallel
Strand 5	B	303	312	anti-parallel
Strand 6	B	288	291	anti-parallel
Strand 7	B	269	272	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	227	234	anti-parallel
Strand 3	B	168	178	parallel
Strand 4	B	240	248	anti-parallel
Strand 5	B	303	312	anti-parallel
Strand 6	B	296	300	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	60	first strand
Strand 2	C	63	66	anti-parallel
Strand 3	C	69	74	anti-parallel
Strand 4	C	27	32	parallel
Strand 5	C	3	7	parallel
Strand 6	C	91	94	parallel
Strand 7	C	115	118	parallel
Strand 8	C	144	146	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	209	first strand
Strand 2	C	227	234	anti-parallel
Strand 3	C	168	178	parallel
Strand 4	C	240	248	anti-parallel
Strand 5	C	303	312	anti-parallel
Strand 6	C	288	291	anti-parallel
Strand 7	C	269	272	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	209	first strand
Strand 2	C	227	234	anti-parallel
Strand 3	C	168	178	parallel
Strand 4	C	240	248	anti-parallel
Strand 5	C	303	312	anti-parallel
Strand 6	C	296	300	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	60	first strand
Strand 2	D	63	66	anti-parallel
Strand 3	D	69	74	anti-parallel
Strand 4	D	26	32	parallel
Strand 5	D	2	7	parallel
Strand 6	D	91	94	parallel
Strand 7	D	115	118	parallel
Strand 8	D	144	146	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	209	first strand
Strand 2	D	227	234	anti-parallel
Strand 3	D	168	178	parallel
Strand 4	D	240	248	anti-parallel
Strand 5	D	303	312	anti-parallel
Strand 6	D	288	291	anti-parallel
Strand 7	D	269	272	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	209	first strand
Strand 2	D	227	234	anti-parallel
Strand 3	D	168	178	parallel
Strand 4	D	240	248	anti-parallel
Strand 5	D	303	312	anti-parallel
Strand 6	D	296	300	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FZI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FZI