Analysis of interatomic Contacts of Structural Units in PDB entry:
6FZV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FZV entry

There are 3 chains in PDB entry 6FZV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 5	LEU 245
B	LYS 7	LEU 245
C	ASN 9	GLY 183

There are 16 helices in PDB entry 6FZV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	29	Right-handed alpha
Helix 2	AA2	A	40	48	Right-handed alpha
Helix 3	AA3	A	106	111	Right-handed alpha
Helix 4	AA4	A	125	139	Right-handed alpha
Helix 5	AA5	A	184	188	Right-handed 310
Helix 6	AA6	A	214	218	Right-handed 310
Helix 7	AA7	B	9	29	Right-handed alpha
Helix 8	AA8	B	40	48	Right-handed alpha
Helix 9	AA9	B	106	111	Right-handed alpha
Helix 10	AB1	B	125	140	Right-handed alpha
Helix 11	AB2	B	214	218	Right-handed 310
Helix 12	AB3	C	10	29	Right-handed alpha
Helix 13	AB4	C	40	48	Right-handed alpha
Helix 14	AB5	C	125	140	Right-handed alpha
Helix 15	AB6	C	184	188	Right-handed 310
Helix 16	AB7	C	214	218	Right-handed 310

There are 13 sheets in PDB entry 6FZV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	69	74	anti-parallel
Strand 3	A	79	82	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	142	152	anti-parallel
Strand 6	A	234	239	anti-parallel
Strand 7	A	88	92	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	69	74	anti-parallel
Strand 3	A	79	82	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	142	152	anti-parallel
Strand 6	A	203	212	anti-parallel
Strand 7	A	190	194	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	179	first strand
Strand 2	A	170	172	anti-parallel
Strand 3	A	222	224	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	58	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	79	82	anti-parallel
Strand 4	B	234	245	anti-parallel
Strand 5	B	88	92	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	58	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	79	82	anti-parallel
Strand 4	B	234	245	anti-parallel
Strand 5	B	142	152	anti-parallel
Strand 6	B	204	212	anti-parallel
Strand 7	B	190	194	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	179	first strand
Strand 2	B	170	172	anti-parallel
Strand 3	B	222	224	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	79	82	anti-parallel
Strand 4	C	235	245	anti-parallel
Strand 5	C	88	92	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	79	82	anti-parallel
Strand 4	C	235	245	anti-parallel
Strand 5	C	142	151	anti-parallel
Strand 6	C	204	212	anti-parallel
Strand 7	C	190	194	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	179	first strand
Strand 2	C	170	172	anti-parallel
Strand 3	C	222	224	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	17	first strand
Strand 2	D	36	43	parallel
Strand 3	D	101	108	anti-parallel
Strand 4	D	69	74	anti-parallel
Strand 5	D	81	86	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	24	first strand
Strand 2	D	116	122	anti-parallel
Strand 3	D	51	58	anti-parallel
Strand 4	D	95	96	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	138	first strand
Strand 2	D	159	165	parallel
Strand 3	D	227	232	anti-parallel
Strand 4	D	192	196	anti-parallel
Strand 5	D	206	210	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	146	first strand
Strand 2	D	240	248	anti-parallel
Strand 3	D	172	181	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FZV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FZV