Analysis of interatomic Contacts of Structural Units in PDB entry:
6G00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G00 entry

There is 1 chain in PDB entry 6G00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ASP 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6G00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed alpha
Helix 2
AA2
A
14 19Right-handed alpha
Helix 3
AA3
A
22 40Right-handed alpha
Helix 4
AA4
A
72 85Right-handed alpha
Helix 5
AA5
A
87 102Right-handed alpha
Helix 6
AA6
A
131 150Right-handed alpha
Helix 7
AA7
A
153 156Right-handed 310
Helix 8
AA8
A
157 172Right-handed alpha
Helix 9
AA9
A
202 206Right-handed 310
Helix 10
AB1
A
210 214Right-handed 310
Helix 11
AB2
A
215 226Right-handed alpha
Helix 12
AB3
A
227 229Right-handed 310
Helix 13
AB4
A
230 249Right-handed alpha
Helix 14
AB5
A
272 277Right-handed 310
Helix 15
AB6
A
281 283Right-handed 310
Helix 16
AB7
A
284 297Right-handed alpha
Helix 17
AB8
A
301 316Right-handed alpha
Helix 18
AB9
A
336 346Right-handed alpha
Helix 19
AC1
A
347 349Right-handed 310
Helix 20
AC2
A
354 364Right-handed alpha
Helix 21
AC3
A
372 388Right-handed alpha
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There are 3 sheets in PDB entry 6G00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 54first strand
Strand 2
A
57 64anti-parallel
Strand 3
A
69 71anti-parallel
Strand 4
A
118 120anti-parallel
Strand 5
A
125 127anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 177first strand
Strand 2
A
184 186anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
330 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il