Analysis of interatomic Contacts of Structural Units in PDB entry:
6G0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G0C entry

There is 1 chain in PDB entry 6G0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 222PRO 901
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6G0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
237 251Right-handed alpha
Helix 2
AA2
A
278 303Right-handed alpha
Helix 3
AA3
A
314 318Right-handed 310
Helix 4
AA4
A
319 332Right-handed alpha
Helix 5
AA5
A
343 365Right-handed alpha
Helix 6
AA6
A
376 389Right-handed alpha
Helix 7
AA7
A
390 394Right-handed 310
Helix 8
AA8
A
397 409Right-handed alpha
Helix 9
AA9
A
410 414Right-handed 310
Helix 10
AB1
A
418 452Right-handed alpha
Helix 11
AB2
A
515 522Right-handed alpha
Helix 12
AB3
A
522 527Right-handed alpha
Helix 13
AB4
A
544 553Right-handed alpha
Helix 14
AB5
A
554 563Right-handed alpha
Helix 15
AB6
A
563 587Right-handed alpha
Helix 16
AB7
A
599 615Right-handed alpha
Helix 17
AB8
A
616 619Right-handed 310
Helix 18
AB9
A
632 643Right-handed alpha
Helix 19
AC1
A
644 651Right-handed alpha
Helix 20
AC2
A
653 667Right-handed alpha
Helix 21
AC3
A
684 692Right-handed alpha
Helix 22
AC4
A
702 714Right-handed alpha
Helix 23
AC5
A
715 727Right-handed alpha
Helix 24
AC6
A
734 757Right-handed alpha
Helix 25
AC7
A
771 788Right-handed alpha
Helix 26
AC8
A
824 830Right-handed alpha
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There are 5 sheets in PDB entry 6G0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
270 272anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 469first strand
Strand 2
A
474 475anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 626first strand
Strand 2
A
629 631anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 672first strand
Strand 2
A
682 683anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
821 822first strand
Strand 2
A
763 768anti-parallel
Strand 3
A
836 841anti-parallel
Strand 4
A
890 899parallel
Strand 5
A
871 881anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il