Analysis of interatomic Contacts of Structural Units in PDB entry:
6G0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6G0L entry

There are 12 chains in PDB entry 6G0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 38	ARG 134
B	LYS 20	GLY 102
C	THR 16	LYS 118
D	LYS 28	LYS 122
E	HIS 39	ALA 135
F	GLY 11	GLY 102
G	ALA 14	LYS 118
H	THR 29	ALA 121
I	A -86	A 89
J	T -89	T 87
M	ASP 175	GLY 1266
W	ASP 175	ASN 1268

There are101 helices in PDB entry 6G0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	46	57	Right-handed alpha
Helix 2	AA2	A	63	79	Right-handed alpha
Helix 3	AA3	A	85	114	Right-handed alpha
Helix 4	AA4	A	120	132	Right-handed alpha
Helix 5	AA5	B	25	29	Right-handed 310
Helix 6	AA6	B	30	42	Right-handed alpha
Helix 7	AA7	B	49	76	Right-handed alpha
Helix 8	AA8	B	82	94	Right-handed alpha
Helix 9	AA9	C	17	22	Right-handed alpha
Helix 10	AB1	C	26	37	Right-handed alpha
Helix 11	AB2	C	46	73	Right-handed alpha
Helix 12	AB3	C	79	90	Right-handed alpha
Helix 13	AB4	C	91	97	Right-handed alpha
Helix 14	AB5	D	34	46	Right-handed alpha
Helix 15	AB6	D	54	79	Right-handed alpha
Helix 16	AB7	D	87	99	Right-handed alpha
Helix 17	AB8	D	100	121	Right-handed alpha
Helix 18	AB9	E	48	57	Right-handed alpha
Helix 19	AC1	E	65	79	Right-handed alpha
Helix 20	AC2	E	85	114	Right-handed alpha
Helix 21	AC3	E	122	132	Right-handed alpha
Helix 22	AC4	F	30	42	Right-handed alpha
Helix 23	AC5	F	47	76	Right-handed alpha
Helix 24	AC6	F	82	93	Right-handed alpha
Helix 25	AC7	G	16	21	Right-handed alpha
Helix 26	AC8	G	26	34	Right-handed alpha
Helix 27	AC9	G	46	73	Right-handed alpha
Helix 28	AD1	G	79	90	Right-handed alpha
Helix 29	AD2	G	90	98	Right-handed alpha
Helix 30	AD3	H	34	46	Right-handed alpha
Helix 31	AD4	H	52	81	Right-handed alpha
Helix 32	AD5	H	89	99	Right-handed alpha
Helix 33	AD6	H	100	121	Right-handed alpha
Helix 34	AD7	M	203	210	Right-handed alpha
Helix 35	AD8	M	221	225	Right-handed 310
Helix 36	AD9	M	239	257	Right-handed alpha
Helix 37	AE1	M	264	282	Right-handed alpha
Helix 38	AE2	M	283	285	Right-handed 310
Helix 39	AE3	M	331	344	Right-handed alpha
Helix 40	AE4	M	347	351	Right-handed 310
Helix 41	AE5	M	378	392	Right-handed alpha
Helix 42	AE6	M	406	422	Right-handed alpha
Helix 43	AE7	M	436	448	Right-handed alpha
Helix 44	AE8	M	460	471	Right-handed alpha
Helix 45	AE9	M	491	498	Right-handed alpha
Helix 46	AF1	M	499	504	Right-handed alpha
Helix 47	AF2	M	515	520	Right-handed 310
Helix 48	AF3	M	523	530	Right-handed alpha
Helix 49	AF4	M	548	560	Right-handed alpha
Helix 50	AF5	M	578	591	Right-handed alpha
Helix 51	AF6	M	598	606	Right-handed 310
Helix 52	AF7	M	619	628	Right-handed alpha
Helix 53	AF8	M	652	658	Right-handed alpha
Helix 54	AF9	M	668	673	Right-handed alpha
Helix 55	AG1	M	683	692	Right-handed alpha
Helix 56	AG2	M	694	709	Right-handed alpha
Helix 57	AG3	M	720	731	Right-handed alpha
Helix 58	AG4	M	746	758	Right-handed alpha
Helix 59	AG5	M	796	803	Right-handed alpha
Helix 60	AG6	M	825	836	Right-handed alpha
Helix 61	AG7	M	1011	1026	Right-handed alpha
Helix 62	AG8	M	1031	1037	Right-handed alpha
Helix 63	AG9	M	1045	1090	Right-handed alpha
Helix 64	AH1	M	1103	1113	Right-handed alpha
Helix 65	AH2	M	1130	1149	Right-handed alpha
Helix 66	AH3	M	1154	1158	Right-handed 310
Helix 67	AH4	M	1176	1190	Right-handed alpha
Helix 68	AH5	M	1194	1199	Right-handed alpha
Helix 69	AH6	M	1206	1210	Right-handed 310
Helix 70	AH7	M	1249	1266	Right-handed alpha
Helix 71	AH8	W	203	210	Right-handed alpha
Helix 72	AH9	W	239	255	Right-handed alpha
Helix 73	AI1	W	264	283	Right-handed alpha
Helix 74	AI2	W	331	344	Right-handed alpha
Helix 75	AI3	W	383	388	Right-handed alpha
Helix 76	AI4	W	406	417	Right-handed alpha
Helix 77	AI5	W	436	446	Right-handed alpha
Helix 78	AI6	W	460	469	Right-handed alpha
Helix 79	AI7	W	491	498	Right-handed alpha
Helix 80	AI8	W	498	505	Right-handed alpha
Helix 81	AI9	W	548	560	Right-handed alpha
Helix 82	AJ1	W	578	591	Right-handed alpha
Helix 83	AJ2	W	619	628	Right-handed alpha
Helix 84	AJ3	W	629	631	Right-handed 310
Helix 85	AJ4	W	639	653	Right-handed alpha
Helix 86	AJ5	W	668	673	Right-handed alpha
Helix 87	AJ6	W	683	693	Right-handed alpha
Helix 88	AJ7	W	694	709	Right-handed alpha
Helix 89	AJ8	W	720	732	Right-handed alpha
Helix 90	AJ9	W	746	759	Right-handed alpha
Helix 91	AK1	W	796	802	Right-handed alpha
Helix 92	AK2	W	825	838	Right-handed alpha
Helix 93	AK3	W	1010	1025	Right-handed alpha
Helix 94	AK4	W	1030	1037	Right-handed alpha
Helix 95	AK5	W	1044	1091	Right-handed alpha
Helix 96	AK6	W	1102	1112	Right-handed alpha
Helix 97	AK7	W	1129	1148	Right-handed alpha
Helix 98	AK8	W	1153	1157	Right-handed 310
Helix 99	AK9	W	1175	1190	Right-handed alpha
Helix 100	AL1	W	1194	1200	Right-handed alpha
Helix 101	AL2	W	1248	1265	Right-handed alpha

There are 15 sheets in PDB entry 6G0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	B	45	46	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	G	101	102	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	102	first strand
Strand 2	F	97	98	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	179	187	first strand
Strand 2	M	211	217	anti-parallel
Strand 3	M	226	228	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	287	297	first strand
Strand 2	M	303	311	anti-parallel
Strand 3	M	321	323	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	487	490	first strand
Strand 2	M	428	431	parallel
Strand 3	M	509	513	parallel
Strand 4	M	536	540	parallel
Strand 5	M	397	399	parallel
Strand 6	M	594	595	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	612	616	first strand
Strand 2	M	815	821	parallel
Strand 3	M	785	788	parallel
Strand 4	M	714	717	parallel
Strand 5	M	766	768	parallel
Strand 6	M	738	739	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	179	187	first strand
Strand 2	W	211	217	anti-parallel
Strand 3	W	226	228	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	287	297	first strand
Strand 2	W	303	311	anti-parallel
Strand 3	W	321	323	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	397	399	first strand
Strand 2	W	538	540	parallel
Strand 3	W	510	513	parallel
Strand 4	W	429	431	parallel
Strand 5	W	488	490	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	612	613	first strand
Strand 2	W	815	818	parallel
Strand 3	W	785	788	parallel
Strand 4	W	714	717	parallel
Strand 5	W	766	769	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	1118	1119	first strand
Strand 2	W	1127	1128	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6G0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6G0L