Analysis of interatomic Contacts of Structural Units in PDB entry:
6G11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G11 entry

There are 6 chains in PDB entry 6G11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 32PHE 113
A
 LYS 188ALA 260
B
 LYS 188ASP 263
F
 ALA 32PHE 113
D
 LYS 188ALA 260
E
 LYS 188ASP 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6G11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
34 38Right-handed 310
Helix 2
AA2
A
202 212Right-handed alpha
Helix 3
AA3
A
237 249Right-handed alpha
Helix 4
AA4
B
202 212Right-handed alpha
Helix 5
AA5
B
237 249Right-handed alpha
Helix 6
AA6
F
34 38Right-handed 310
Helix 7
AA7
D
202 212Right-handed alpha
Helix 8
AA8
D
237 249Right-handed alpha
Helix 9
AA9
E
202 212Right-handed alpha
Helix 10
AB1
E
237 249Right-handed alpha
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There are 4 sheets in PDB entry 6G11. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 70first strand
Strand 2
C
54 60anti-parallel
Strand 3
C
103 109anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 96first strand
Strand 2
C
83 89anti-parallel
Strand 3
C
74 80anti-parallel
Strand 4
B
252 258anti-parallel
Strand 5
B
189 195anti-parallel
Strand 6
B
228 233anti-parallel
Strand 7
B
216 222anti-parallel
Strand 8
A
216 222anti-parallel
Strand 9
A
228 233anti-parallel
Strand 10
A
189 195anti-parallel
Strand 11
A
252 259anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
63 70first strand
Strand 2
F
54 60anti-parallel
Strand 3
F
103 109anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
95 96first strand
Strand 2
F
83 89anti-parallel
Strand 3
F
74 80anti-parallel
Strand 4
E
252 258anti-parallel
Strand 5
E
189 195anti-parallel
Strand 6
E
228 233anti-parallel
Strand 7
E
216 222anti-parallel
Strand 8
D
216 222anti-parallel
Strand 9
D
228 233anti-parallel
Strand 10
D
189 195anti-parallel
Strand 11
D
252 259anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il