Analysis of interatomic Contacts of Structural Units in PDB entry:
6G13


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G13 entry

There are 4 chains in PDB entry 6G13 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 260PRO 372
B
 LYS 259PRO 372
C
 LYS 259PRO 372
D
 ASN 258PRO 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6G13. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 264Right-handed 310
Helix 2
AA2
A
271 277Right-handed alpha
Helix 3
AA3
A
290 297Right-handed alpha
Helix 4
AA4
A
298 300Right-handed 310
Helix 5
AA5
A
302 307Right-handed alpha
Helix 6
AA6
A
308 310Right-handed 310
Helix 7
AA7
A
312 320Right-handed alpha
Helix 8
AA8
A
353 365Right-handed alpha
Helix 9
AA9
A
366 371Right-handed 310
Helix 10
AB1
B
260 264Right-handed 310
Helix 11
AB2
B
271 277Right-handed alpha
Helix 12
AB3
B
290 297Right-handed alpha
Helix 13
AB4
B
298 300Right-handed 310
Helix 14
AB5
B
302 307Right-handed alpha
Helix 15
AB6
B
308 310Right-handed 310
Helix 16
AB7
B
312 320Right-handed alpha
Helix 17
AB8
B
353 365Right-handed alpha
Helix 18
AB9
B
366 371Right-handed 310
Helix 19
AC1
C
260 264Right-handed 310
Helix 20
AC2
C
271 277Right-handed alpha
Helix 21
AC3
C
290 297Right-handed alpha
Helix 22
AC4
C
298 300Right-handed 310
Helix 23
AC5
C
302 307Right-handed alpha
Helix 24
AC6
C
308 310Right-handed 310
Helix 25
AC7
C
312 320Right-handed alpha
Helix 26
AC8
C
353 365Right-handed alpha
Helix 27
AC9
C
366 371Right-handed 310
Helix 28
AD1
D
260 264Right-handed 310
Helix 29
AD2
D
271 277Right-handed alpha
Helix 30
AD3
D
290 297Right-handed alpha
Helix 31
AD4
D
298 300Right-handed 310
Helix 32
AD5
D
302 307Right-handed alpha
Helix 33
AD6
D
308 310Right-handed 310
Helix 34
AD7
D
312 320Right-handed alpha
Helix 35
AD8
D
353 365Right-handed alpha
Helix 36
AD9
D
366 371Right-handed 310
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There are 2 sheets in PDB entry 6G13. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 325first strand
Strand 2
A
338 347anti-parallel
Strand 3
C
334 346anti-parallel
Strand 4
C
321 330anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 327first strand
Strand 2
B
336 346anti-parallel
Strand 3
D
334 347anti-parallel
Strand 4
D
321 330anti-parallel
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