Analysis of interatomic Contacts of Structural Units in PDB entry:
6G1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G1H entry

There is 1 chain in PDB entry 6G1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -6GLU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6G1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
42 47Right-handed alpha
Helix 3
AA3
A
59 68Right-handed alpha
Helix 4
AA4
A
79 92Right-handed alpha
Helix 5
AA5
A
101 105Right-handed 310
Helix 6
AA6
A
111 125Right-handed alpha
Helix 7
AA7
A
141 149Right-handed alpha
Helix 8
AA8
A
169 176Right-handed alpha
Helix 9
AA9
A
181 192Right-handed alpha
Helix 10
AB1
A
199 212Right-handed alpha
Helix 11
AB2
A
269 274Right-handed 310
Helix 12
AB3
A
298 310Right-handed alpha
Helix 13
AB4
A
310 316Right-handed alpha
Helix 14
AB5
A
323 327Right-handed 310
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There are 3 sheets in PDB entry 6G1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
26 32parallel
Strand 3
A
2 7parallel
Strand 4
A
71 74parallel
Strand 5
A
96 99parallel
Strand 6
A
128 131parallel
Strand 7
A
320 322parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 226first strand
Strand 2
A
243 254anti-parallel
Strand 3
A
257 267anti-parallel
Strand 4
A
153 164parallel
Strand 5
A
278 286anti-parallel
Strand 6
A
289 293anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
237 238anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il