Analysis of interatomic Contacts of Structural Units in PDB entry:
6G1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G1I entry

There are 4 chains in PDB entry 6G1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 141VAL 263
A
 MET 265TYR 350
B
 ASP 141VAL 263
B
 MET 265TYR 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6G1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
149 160Right-handed alpha
Helix 2
AA2
A
161 185Right-handed alpha
Helix 3
AA3
A
188 205Right-handed alpha
Helix 4
AA4
A
214 217Right-handed 310
Helix 5
AA5
A
228 230Right-handed 310
Helix 6
AA6
A
252 258Right-handed alpha
Helix 7
AA7
A
258 279Right-handed alpha
Helix 8
AA8
A
283 297Right-handed alpha
Helix 9
AA9
A
303 324Right-handed alpha
Helix 10
AB1
A
346 350Right-handed 310
Helix 11
AB2
B
149 160Right-handed alpha
Helix 12
AB3
B
161 176Right-handed alpha
Helix 13
AB4
B
176 185Right-handed alpha
Helix 14
AB5
B
188 205Right-handed alpha
Helix 15
AB6
B
214 217Right-handed 310
Helix 16
AB7
B
228 230Right-handed 310
Helix 17
AB8
B
252 258Right-handed alpha
Helix 18
AB9
B
258 279Right-handed alpha
Helix 19
AC1
B
283 297Right-handed alpha
Helix 20
AC2
B
303 324Right-handed alpha
Helix 21
AC3
B
346 350Right-handed 310
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There are 2 sheets in PDB entry 6G1I. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
219 220anti-parallel
Strand 3
A
225 226anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 212first strand
Strand 2
B
219 220anti-parallel
Strand 3
B
225 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il