Analysis of interatomic Contacts of Structural Units in PDB entry:
6G21


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G21 entry

There are 2 chains in PDB entry 6G21 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4VAL 507
B
 THR 4VAL 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 6G21. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
12 16Right-handed 310
Helix 3
AA3
A
41 45Right-handed 310
Helix 4
AA4
A
97 107Right-handed alpha
Helix 5
AA5
A
123 127Right-handed 310
Helix 6
AA6
A
129 138Right-handed alpha
Helix 7
AA7
A
138 156Right-handed alpha
Helix 8
AA8
A
169 182Right-handed alpha
Helix 9
AA9
A
197 213Right-handed alpha
Helix 10
AB1
A
222 238Right-handed alpha
Helix 11
AB2
A
239 242Right-handed 310
Helix 12
AB3
A
250 254Right-handed 310
Helix 13
AB4
A
257 262Right-handed 310
Helix 14
AB5
A
268 272Right-handed 310
Helix 15
AB6
A
274 285Right-handed alpha
Helix 16
AB7
A
291 293Right-handed 310
Helix 17
AB8
A
304 312Right-handed alpha
Helix 18
AB9
A
318 328Right-handed alpha
Helix 19
AC1
A
336 340Right-handed 310
Helix 20
AC2
A
341 352Right-handed alpha
Helix 21
AC3
A
353 356Right-handed 310
Helix 22
AC4
A
363 370Right-handed alpha
Helix 23
AC5
A
385 401Right-handed alpha
Helix 24
AC6
A
403 408Right-handed alpha
Helix 25
AC7
A
434 438Right-handed 310
Helix 26
AC8
A
446 458Right-handed alpha
Helix 27
AC9
A
500 502Right-handed 310
Helix 28
AD1
B
5 13Right-handed alpha
Helix 29
AD2
B
14 16Right-handed 310
Helix 30
AD3
B
41 45Right-handed 310
Helix 31
AD4
B
97 107Right-handed alpha
Helix 32
AD5
B
123 127Right-handed 310
Helix 33
AD6
B
129 138Right-handed alpha
Helix 34
AD7
B
138 156Right-handed alpha
Helix 35
AD8
B
169 182Right-handed alpha
Helix 36
AD9
B
197 213Right-handed alpha
Helix 37
AE1
B
222 238Right-handed alpha
Helix 38
AE2
B
239 242Right-handed 310
Helix 39
AE3
B
250 254Right-handed 310
Helix 40
AE4
B
257 262Right-handed 310
Helix 41
AE5
B
268 272Right-handed 310
Helix 42
AE6
B
274 285Right-handed alpha
Helix 43
AE7
B
304 311Right-handed alpha
Helix 44
AE8
B
318 328Right-handed alpha
Helix 45
AE9
B
336 340Right-handed 310
Helix 46
AF1
B
341 352Right-handed alpha
Helix 47
AF2
B
353 356Right-handed 310
Helix 48
AF3
B
363 369Right-handed alpha
Helix 49
AF4
B
385 401Right-handed alpha
Helix 50
AF5
B
403 408Right-handed alpha
Helix 51
AF6
B
434 438Right-handed 310
Helix 52
AF7
B
446 458Right-handed alpha
Helix 53
AF8
B
500 502Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 6G21. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 29first strand
Strand 2
A
55 65anti-parallel
Strand 3
A
68 77anti-parallel
Strand 4
A
110 114anti-parallel
Strand 5
A
83 86parallel
Strand 6
A
162 168parallel
Strand 7
A
188 192parallel
Strand 8
A
372 378parallel
Strand 9
A
411 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
48 51anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 289first strand
Strand 2
A
295 297anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 469first strand
Strand 2
A
477 483anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 492first strand
Strand 2
A
504 506anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 29first strand
Strand 2
B
55 65anti-parallel
Strand 3
B
68 77anti-parallel
Strand 4
B
110 114anti-parallel
Strand 5
B
83 86parallel
Strand 6
B
162 168parallel
Strand 7
B
188 192parallel
Strand 8
B
372 378parallel
Strand 9
B
411 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 36first strand
Strand 2
B
48 51anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 289first strand
Strand 2
B
295 297anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 469first strand
Strand 2
B
477 483anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
490 492first strand
Strand 2
B
504 506anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il