Analysis of interatomic Contacts of Structural Units in PDB entry:
6G2G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G2G entry

There are 2 chains in PDB entry 6G2G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 306
B
 MET 1GLN 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6G2G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 35Right-handed alpha
Helix 2
AA2
A
50 55Right-handed alpha
Helix 3
AA3
A
92 94Right-handed 310
Helix 4
AA4
A
106 119Right-handed alpha
Helix 5
AA5
A
137 151Right-handed alpha
Helix 6
AA6
A
169 184Right-handed alpha
Helix 7
AA7
A
212 221Right-handed alpha
Helix 8
AA8
A
232 242Right-handed alpha
Helix 9
AA9
A
279 284Right-handed alpha
Helix 10
AB1
A
285 287Right-handed 310
Helix 11
AB2
A
288 305Right-handed alpha
Helix 12
AB3
B
20 35Right-handed alpha
Helix 13
AB4
B
50 55Right-handed alpha
Helix 14
AB5
B
92 94Right-handed 310
Helix 15
AB6
B
106 118Right-handed alpha
Helix 16
AB7
B
137 151Right-handed alpha
Helix 17
AB8
B
170 184Right-handed alpha
Helix 18
AB9
B
213 221Right-handed alpha
Helix 19
AC1
B
232 242Right-handed alpha
Helix 20
AC2
B
276 278Right-handed 310
Helix 21
AC3
B
279 285Right-handed alpha
Helix 22
AC4
B
288 305Right-handed alpha
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There are 5 sheets in PDB entry 6G2G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
39 43parallel
Strand 4
A
125 131parallel
Strand 5
A
6 14parallel
Strand 6
A
156 163parallel
Strand 7
A
187 199parallel
Strand 8
A
202 206anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
39 43parallel
Strand 4
A
125 131parallel
Strand 5
A
6 14parallel
Strand 6
A
156 163parallel
Strand 7
A
187 199parallel
Strand 8
A
225 231parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 75first strand
Strand 2
B
86 90anti-parallel
Strand 3
B
39 43parallel
Strand 4
B
125 131parallel
Strand 5
B
6 13parallel
Strand 6
B
156 163parallel
Strand 7
B
187 199parallel
Strand 8
B
202 206anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 75first strand
Strand 2
B
86 90anti-parallel
Strand 3
B
39 43parallel
Strand 4
B
125 131parallel
Strand 5
B
6 13parallel
Strand 6
B
156 163parallel
Strand 7
B
187 199parallel
Strand 8
B
225 231parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
68 69anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il