Analysis of interatomic Contacts of Structural Units in PDB entry:
6G4H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G4H entry

There is 1 chain in PDB entry 6G4H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 196GLN 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6G4H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
203 212Right-handed alpha
Helix 2
AA2
A
228 231Right-handed 310
Helix 3
AA3
A
330 337Right-handed alpha
Helix 4
AA4
A
345 359Right-handed alpha
Helix 5
AA5
A
361 376Right-handed alpha
Helix 6
AA6
A
390 398Right-handed alpha
Helix 7
AA7
A
403 418Right-handed alpha
Helix 8
AA8
A
465 470Right-handed alpha
Helix 9
AA9
A
470 476Right-handed alpha
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There are 6 sheets in PDB entry 6G4H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
247 248anti-parallel
Strand 3
A
241 242anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 290first strand
Strand 2
A
313 319anti-parallel
Strand 3
A
268 274anti-parallel
Strand 4
A
216 222anti-parallel
Strand 5
A
439 443anti-parallel
Strand 6
A
432 434anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
233 239anti-parallel
Strand 3
A
422 429anti-parallel
Strand 4
A
447 455anti-parallel
Strand 5
A
459 463anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
324 325anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
303 305anti-parallel
Strand 3
A
295 297anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 380first strand
Strand 2
A
401 402parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il