Analysis of interatomic Contacts of Structural Units in PDB entry:
6G4J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G4J entry

There are 2 chains in PDB entry 6G4J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 273
B
 PRO 3HIS 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6G4J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
59 75Right-handed alpha
Helix 3
AA3
A
112 121Right-handed alpha
Helix 4
AA4
A
123 142Right-handed alpha
Helix 5
AA5
A
150 152Right-handed 310
Helix 6
AA6
A
182 186Right-handed 310
Helix 7
AA7
A
198 216Right-handed alpha
Helix 8
AA8
A
224 235Right-handed alpha
Helix 9
AA9
A
236 242Right-handed alpha
Helix 10
AB1
A
242 252Right-handed alpha
Helix 11
AB2
A
256 273Right-handed alpha
Helix 12
AB3
B
4 13Right-handed alpha
Helix 13
AB4
B
17 32Right-handed alpha
Helix 14
AB5
B
33 35Right-handed 310
Helix 15
AB6
B
36 44Right-handed alpha
Helix 16
AB7
B
48 63Right-handed alpha
Helix 17
AB8
B
64 66Right-handed 310
Helix 18
AB9
B
67 74Right-handed alpha
Helix 19
AC1
B
75 77Right-handed 310
Helix 20
AC2
B
79 94Right-handed alpha
Helix 21
AC3
B
95 109Right-handed alpha
Helix 22
AC4
B
110 123Right-handed alpha
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There are 3 sheets in PDB entry 6G4J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
27 37anti-parallel
Strand 3
A
40 47anti-parallel
Strand 4
A
50 57anti-parallel
Strand 5
A
98 105anti-parallel
Strand 6
A
85 93anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
172 173anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 157first strand
Strand 2
A
162 165anti-parallel
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