Analysis of interatomic Contacts of Structural Units in PDB entry:
6G56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G56 entry

There are 2 chains in PDB entry 6G56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 382
B
 PHE 1LYS 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6G56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
38 44Right-handed alpha
Helix 3
AA3
A
46 56Right-handed alpha
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
89 91Right-handed 310
Helix 6
AA6
A
92 99Right-handed alpha
Helix 7
AA7
A
107 118Right-handed alpha
Helix 8
AA8
A
143 157Right-handed alpha
Helix 9
AA9
A
177 191Right-handed alpha
Helix 10
AB1
A
203 210Right-handed alpha
Helix 11
AB2
A
221 226Right-handed 310
Helix 12
AB3
A
230 237Right-handed alpha
Helix 13
AB4
A
283 287Right-handed 310
Helix 14
AB5
A
289 293Right-handed 310
Helix 15
AB6
A
341 349Right-handed alpha
Helix 16
AB7
A
352 360Right-handed alpha
Helix 17
AB8
A
378 382Right-handed 310
Helix 18
AB9
B
15 29Right-handed alpha
Helix 19
AC1
B
38 44Right-handed alpha
Helix 20
AC2
B
46 56Right-handed alpha
Helix 21
AC3
B
66 76Right-handed alpha
Helix 22
AC4
B
89 91Right-handed 310
Helix 23
AC5
B
92 99Right-handed alpha
Helix 24
AC6
B
107 117Right-handed alpha
Helix 25
AC7
B
143 157Right-handed alpha
Helix 26
AC8
B
177 191Right-handed alpha
Helix 27
AC9
B
203 210Right-handed alpha
Helix 28
AD1
B
221 226Right-handed 310
Helix 29
AD2
B
230 237Right-handed alpha
Helix 30
AD3
B
264 268Right-handed 310
Helix 31
AD4
B
283 287Right-handed 310
Helix 32
AD5
B
289 293Right-handed 310
Helix 33
AD6
B
341 349Right-handed alpha
Helix 34
AD7
B
352 360Right-handed alpha
Helix 35
AD8
B
378 382Right-handed 310
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There are 6 sheets in PDB entry 6G56. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 257first strand
Strand 2
A
275 280anti-parallel
Strand 3
A
315 319anti-parallel
Strand 4
A
302 307anti-parallel
Strand 5
A
296 299anti-parallel
Strand 6
A
328 332anti-parallel
Strand 7
A
245 250anti-parallel
Strand 8
A
9 14anti-parallel
Strand 9
A
366 370parallel
Strand 10
A
373 377anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
61 64parallel
Strand 3
A
81 84parallel
Strand 4
A
102 105parallel
Strand 5
A
126 131parallel
Strand 6
A
160 166parallel
Strand 7
A
198 200parallel
Strand 8
A
217 218parallel
Strand 9
A
33 37parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
268 270anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 257first strand
Strand 2
B
275 280anti-parallel
Strand 3
B
315 319anti-parallel
Strand 4
B
302 307anti-parallel
Strand 5
B
296 299anti-parallel
Strand 6
B
328 332anti-parallel
Strand 7
B
245 250anti-parallel
Strand 8
B
9 14anti-parallel
Strand 9
B
366 370parallel
Strand 10
B
373 377anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
61 64parallel
Strand 3
B
81 84parallel
Strand 4
B
102 105parallel
Strand 5
B
126 131parallel
Strand 6
B
160 166parallel
Strand 7
B
198 200parallel
Strand 8
B
217 218parallel
Strand 9
B
33 37parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
269 270anti-parallel
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