Analysis of interatomic Contacts of Structural Units in PDB entry:
6G57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G57 entry

There are 4 chains in PDB entry 6G57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 204PRO 322
B
 ARG 205PRO 322
C
 ARG 205PRO 322
D
 ARG 205PRO 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6G57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
241 249Right-handed alpha
Helix 2
AA2
A
250 252Right-handed 310
Helix 3
AA3
A
275 286Right-handed alpha
Helix 4
AA4
B
240 249Right-handed alpha
Helix 5
AA5
B
275 287Right-handed alpha
Helix 6
AA6
C
240 249Right-handed alpha
Helix 7
AA7
C
275 287Right-handed alpha
Helix 8
AA8
D
240 248Right-handed alpha
Helix 9
AA9
D
279 285Right-handed alpha
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There are 2 sheets in PDB entry 6G57. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 270first strand
Strand 2
A
234 240anti-parallel
Strand 3
A
207 216anti-parallel
Strand 4
A
310 321anti-parallel
Strand 5
A
289 300anti-parallel
Strand 6
B
289 300anti-parallel
Strand 7
B
310 321anti-parallel
Strand 8
B
207 217anti-parallel
Strand 9
B
234 239anti-parallel
Strand 10
B
269 271anti-parallel
Strand 11
B
252 254anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
252 254first strand
Strand 2
C
268 271anti-parallel
Strand 3
C
235 239anti-parallel
Strand 4
C
207 215anti-parallel
Strand 5
C
310 321anti-parallel
Strand 6
C
289 300anti-parallel
Strand 7
D
289 298anti-parallel
Strand 8
D
312 321anti-parallel
Strand 9
D
207 215anti-parallel
Strand 10
D
235 238anti-parallel
Strand 11
D
272 273anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il