Analysis of interatomic Contacts of Structural Units in PDB entry:
6G5O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G5O entry

There are 2 chains in PDB entry 6G5O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LEU 385
B
 LYS 2LEU 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6G5O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 17Right-handed alpha
Helix 2
AA2
A
34 44Right-handed alpha
Helix 3
AA3
A
78 93Right-handed alpha
Helix 4
AA4
A
96 118Right-handed alpha
Helix 5
AA5
A
122 126Right-handed alpha
Helix 6
AA6
A
126 140Right-handed alpha
Helix 7
AA7
A
144 153Right-handed alpha
Helix 8
AA8
A
168 186Right-handed alpha
Helix 9
AA9
A
190 197Right-handed alpha
Helix 10
AB1
A
206 221Right-handed alpha
Helix 11
AB2
A
222 239Right-handed alpha
Helix 12
AB3
A
239 249Right-handed alpha
Helix 13
AB4
A
252 265Right-handed alpha
Helix 14
AB5
A
294 299Right-handed alpha
Helix 15
AB6
A
325 329Right-handed 310
Helix 16
AB7
A
332 350Right-handed alpha
Helix 17
AB8
B
10 17Right-handed alpha
Helix 18
AB9
B
34 44Right-handed alpha
Helix 19
AC1
B
78 92Right-handed alpha
Helix 20
AC2
B
93 95Right-handed 310
Helix 21
AC3
B
96 118Right-handed alpha
Helix 22
AC4
B
122 126Right-handed alpha
Helix 23
AC5
B
126 140Right-handed alpha
Helix 24
AC6
B
144 153Right-handed alpha
Helix 25
AC7
B
165 186Right-handed alpha
Helix 26
AC8
B
190 197Right-handed alpha
Helix 27
AC9
B
206 221Right-handed alpha
Helix 28
AD1
B
222 239Right-handed alpha
Helix 29
AD2
B
239 249Right-handed alpha
Helix 30
AD3
B
252 265Right-handed alpha
Helix 31
AD4
B
294 299Right-handed alpha
Helix 32
AD5
B
325 329Right-handed 310
Helix 33
AD6
B
330 331Right-handed 310
Helix 34
AD7
B
332 350Right-handed alpha
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There are 8 sheets in PDB entry 6G5O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
29 32anti-parallel
Strand 3
A
290 293parallel
Strand 4
A
270 274anti-parallel
Strand 5
A
48 49anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
369 384anti-parallel
Strand 3
A
351 366anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
A
203 204anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
283 285anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
29 32anti-parallel
Strand 3
B
290 293parallel
Strand 4
B
270 274anti-parallel
Strand 5
B
48 49anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
369 384anti-parallel
Strand 3
B
351 366anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 200first strand
Strand 2
B
203 204anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 280first strand
Strand 2
B
283 285anti-parallel
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