Analysis of interatomic Contacts of Structural Units in PDB entry:
6G5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G5U entry

There are 2 chains in PDB entry 6G5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 6HIS 263
A
 SER 6HIS 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6G5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 16Right-handed 310
Helix 2
AA2
B
17 22Right-handed alpha
Helix 3
AA3
B
23 27Right-handed 310
Helix 4
AA4
B
36 40Right-handed 310
Helix 5
AA5
B
132 137Right-handed alpha
Helix 6
AA6
B
156 158Right-handed 310
Helix 7
AA7
B
159 164Right-handed alpha
Helix 8
AA8
B
165 170Right-handed 310
Helix 9
AA9
B
182 187Right-handed 310
Helix 10
AB1
B
221 229Right-handed alpha
Helix 11
AB2
A
14 21Right-handed 310
Helix 12
AB3
A
22 27Right-handed 310
Helix 13
AB4
A
132 137Right-handed alpha
Helix 14
AB5
A
156 158Right-handed 310
Helix 15
AB6
A
159 164Right-handed alpha
Helix 16
AB7
A
165 170Right-handed 310
Helix 17
AB8
A
182 187Right-handed 310
Helix 18
AB9
A
221 229Right-handed alpha
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There are 6 sheets in PDB entry 6G5U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
110 111parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
259 260parallel
Strand 3
B
193 198anti-parallel
Strand 4
B
209 214anti-parallel
Strand 5
B
143 152parallel
Strand 6
B
118 126anti-parallel
Strand 7
B
89 99anti-parallel
Strand 8
B
68 72anti-parallel
Strand 9
B
58 63anti-parallel
Strand 10
B
175 177anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
80 83anti-parallel
Strand 3
B
89 99anti-parallel
Strand 4
B
118 126anti-parallel
Strand 5
B
143 152anti-parallel
Strand 6
B
218 220parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
110 111parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
259 260parallel
Strand 3
A
193 198anti-parallel
Strand 4
A
209 214anti-parallel
Strand 5
A
143 152parallel
Strand 6
A
118 126anti-parallel
Strand 7
A
90 99anti-parallel
Strand 8
A
68 72anti-parallel
Strand 9
A
58 63anti-parallel
Strand 10
A
175 177anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
80 84anti-parallel
Strand 3
A
90 99anti-parallel
Strand 4
A
118 126anti-parallel
Strand 5
A
143 152anti-parallel
Strand 6
A
218 220parallel
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