Analysis of interatomic Contacts of Structural Units in PDB entry:
6G7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G7Q entry

There are 2 chains in PDB entry 6G7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 4LYS 319
A
 GLY 4GLU 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6G7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 29Right-handed alpha
Helix 2
AA2
B
38 50Right-handed alpha
Helix 3
AA3
B
51 53Right-handed 310
Helix 4
AA4
B
62 72Right-handed alpha
Helix 5
AA5
B
80 87Right-handed alpha
Helix 6
AA6
B
88 92Right-handed 310
Helix 7
AA7
B
116 120Right-handed 310
Helix 8
AA8
B
123 132Right-handed 310
Helix 9
AA9
B
142 171Right-handed alpha
Helix 10
AB1
B
179 189Right-handed alpha
Helix 11
AB2
B
199 208Right-handed alpha
Helix 12
AB3
B
210 219Right-handed alpha
Helix 13
AB4
B
247 259Right-handed alpha
Helix 14
AB5
B
260 271Right-handed alpha
Helix 15
AB6
B
286 290Right-handed 310
Helix 16
AB7
B
299 305Right-handed alpha
Helix 17
AB8
B
305 316Right-handed alpha
Helix 18
AB9
A
16 29Right-handed alpha
Helix 19
AC1
A
38 50Right-handed alpha
Helix 20
AC2
A
51 53Right-handed 310
Helix 21
AC3
A
62 72Right-handed alpha
Helix 22
AC4
A
80 87Right-handed alpha
Helix 23
AC5
A
88 92Right-handed 310
Helix 24
AC6
A
116 120Right-handed 310
Helix 25
AC7
A
123 132Right-handed 310
Helix 26
AC8
A
142 171Right-handed alpha
Helix 27
AC9
A
179 189Right-handed alpha
Helix 28
AD1
A
199 208Right-handed alpha
Helix 29
AD2
A
210 219Right-handed alpha
Helix 30
AD3
A
247 259Right-handed alpha
Helix 31
AD4
A
260 271Right-handed alpha
Helix 32
AD5
A
286 290Right-handed 310
Helix 33
AD6
A
299 305Right-handed alpha
Helix 34
AD7
A
305 316Right-handed alpha
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There are 4 sheets in PDB entry 6G7Q. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
5 10parallel
Strand 3
B
57 61parallel
Strand 4
B
234 241anti-parallel
Strand 5
B
99 105anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 198first strand
Strand 2
B
106 111anti-parallel
Strand 3
B
220 223anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
5 10parallel
Strand 3
A
57 61parallel
Strand 4
A
234 241anti-parallel
Strand 5
A
99 105anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 198first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
220 223anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il