Analysis of interatomic Contacts of Structural Units in PDB entry:
6G80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G80 entry

There are 4 chains in PDB entry 6G80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6ALA 223
B
 ILE 4HIS 229
M
 ASP 6ALA 223
C
 ASP 6LYS 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6G80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
22 37Right-handed alpha
Helix 3
AA3
A
50 64Right-handed alpha
Helix 4
AA4
A
87 91Right-handed 310
Helix 5
AA5
A
100 112Right-handed alpha
Helix 6
AA6
A
123 130Right-handed alpha
Helix 7
AA7
A
145 157Right-handed alpha
Helix 8
AA8
A
174 178Right-handed 310
Helix 9
AA9
A
180 192Right-handed alpha
Helix 10
AB1
B
5 17Right-handed alpha
Helix 11
AB2
B
22 37Right-handed alpha
Helix 12
AB3
B
50 64Right-handed alpha
Helix 13
AB4
B
87 91Right-handed 310
Helix 14
AB5
B
100 112Right-handed alpha
Helix 15
AB6
B
123 130Right-handed alpha
Helix 16
AB7
B
145 157Right-handed alpha
Helix 17
AB8
B
174 178Right-handed 310
Helix 18
AB9
B
180 192Right-handed alpha
Helix 19
AC1
B
221 225Right-handed 310
Helix 20
AC2
M
7 17Right-handed alpha
Helix 21
AC3
M
22 37Right-handed alpha
Helix 22
AC4
M
50 64Right-handed alpha
Helix 23
AC5
M
87 91Right-handed 310
Helix 24
AC6
M
100 112Right-handed alpha
Helix 25
AC7
M
123 130Right-handed alpha
Helix 26
AC8
M
145 157Right-handed alpha
Helix 27
AC9
M
174 178Right-handed 310
Helix 28
AD1
M
180 192Right-handed alpha
Helix 29
AD2
C
7 17Right-handed alpha
Helix 30
AD3
C
22 37Right-handed alpha
Helix 31
AD4
C
50 64Right-handed alpha
Helix 32
AD5
C
100 112Right-handed alpha
Helix 33
AD6
C
123 130Right-handed alpha
Helix 34
AD7
C
145 157Right-handed alpha
Helix 35
AD8
C
174 178Right-handed 310
Helix 36
AD9
C
180 192Right-handed alpha
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There are 4 sheets in PDB entry 6G80. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 201first strand
Strand 2
A
204 209anti-parallel
Strand 3
A
160 168anti-parallel
Strand 4
A
135 140parallel
Strand 5
A
41 45parallel
Strand 6
A
66 71parallel
Strand 7
A
117 121parallel
Strand 8
B
117 121anti-parallel
Strand 9
B
66 71parallel
Strand 10
B
41 45parallel
Strand 11
B
135 140parallel
Strand 12
B
160 168parallel
Strand 13
B
204 209anti-parallel
Strand 14
B
195 201anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 86first strand
Strand 2
C
82 86anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
117 121first strand
Strand 2
M
66 71parallel
Strand 3
M
41 45parallel
Strand 4
M
135 140parallel
Strand 5
M
160 168parallel
Strand 6
M
204 209anti-parallel
Strand 7
M
195 201anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
117 121first strand
Strand 2
C
66 71parallel
Strand 3
C
41 45parallel
Strand 4
C
135 140parallel
Strand 5
C
160 168parallel
Strand 6
C
204 209anti-parallel
Strand 7
C
195 201anti-parallel
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