Analysis of interatomic Contacts of Structural Units in PDB entry:
6G9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G9C entry

There are 2 chains in PDB entry 6G9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 32GLY 399
B
 LYS 32GLY 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6G9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
47 51Right-handed 310
Helix 3
AA3
A
53 57Right-handed 310
Helix 4
AA4
A
88 95Right-handed alpha
Helix 5
AA5
A
96 99Right-handed 310
Helix 6
AA6
A
116 123Right-handed alpha
Helix 7
AA7
A
125 143Right-handed alpha
Helix 8
AA8
A
156 158Right-handed 310
Helix 9
AA9
A
159 182Right-handed alpha
Helix 10
AB1
A
195 203Right-handed alpha
Helix 11
AB2
A
204 212Right-handed alpha
Helix 12
AB3
A
243 247Right-handed 310
Helix 13
AB4
A
250 262Right-handed alpha
Helix 14
AB5
A
264 266Right-handed 310
Helix 15
AB6
A
311 320Right-handed alpha
Helix 16
AB7
A
346 361Right-handed alpha
Helix 17
AB8
A
369 373Right-handed 310
Helix 18
AB9
A
391 399Right-handed alpha
Helix 19
AC1
B
42 46Right-handed 310
Helix 20
AC2
B
47 51Right-handed 310
Helix 21
AC3
B
53 57Right-handed 310
Helix 22
AC4
B
88 96Right-handed alpha
Helix 23
AC5
B
97 99Right-handed 310
Helix 24
AC6
B
116 123Right-handed alpha
Helix 25
AC7
B
125 143Right-handed alpha
Helix 26
AC8
B
156 158Right-handed 310
Helix 27
AC9
B
159 182Right-handed alpha
Helix 28
AD1
B
195 203Right-handed alpha
Helix 29
AD2
B
204 210Right-handed alpha
Helix 30
AD3
B
243 247Right-handed 310
Helix 31
AD4
B
250 261Right-handed alpha
Helix 32
AD5
B
264 266Right-handed 310
Helix 33
AD6
B
311 320Right-handed alpha
Helix 34
AD7
B
346 361Right-handed alpha
Helix 35
AD8
B
369 373Right-handed 310
Helix 36
AD9
B
392 399Right-handed alpha
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There are 6 sheets in PDB entry 6G9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
64 72anti-parallel
Strand 3
A
104 110parallel
Strand 4
A
147 151parallel
Strand 5
A
187 193parallel
Strand 6
A
214 218parallel
Strand 7
A
268 273parallel
Strand 8
A
364 368parallel
Strand 9
A
34 40parallel
Strand 10
A
64 72parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 296first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
308 310anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 296first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
340 343anti-parallel
Strand 4
A
332 337anti-parallel
Strand 5
A
323 327anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
B
64 72anti-parallel
Strand 3
B
104 110parallel
Strand 4
B
147 151parallel
Strand 5
B
187 193parallel
Strand 6
B
214 218parallel
Strand 7
B
268 273parallel
Strand 8
B
364 368parallel
Strand 9
B
34 40parallel
Strand 10
B
64 72parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 296first strand
Strand 2
B
275 281anti-parallel
Strand 3
B
308 310anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 296first strand
Strand 2
B
275 281anti-parallel
Strand 3
B
340 343anti-parallel
Strand 4
B
332 337anti-parallel
Strand 5
B
323 327anti-parallel
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