Analysis of interatomic Contacts of Structural Units in PDB entry:
6G9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6G9X entry

There are 2 chains in PDB entry 6G9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 7GLN 420
B
TRP 11LYS 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6G9X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 40Right-handed alpha
Helix 2
2
A
46 74Right-handed alpha
Helix 3
4
A
76 95Right-handed alpha
Helix 4
5
A
100 129Right-handed alpha
Helix 5
6
A
134 146Right-handed alpha
Helix 6
7
A
148 160Right-handed alpha
Helix 7
8
A
168 187Right-handed alpha
Helix 8
9
A
221 225Right-handed alpha
Helix 9
10
A
228 257Right-handed alpha
Helix 10
11
A
262 290Right-handed alpha
Helix 11
12
A
293 313Right-handed alpha
Helix 12
13
A
317 346Right-handed alpha
Helix 13
14
A
351 380Right-handed alpha
Helix 14
15
A
384 403Right-handed alpha
Helix 15
16
A
413 418Right-handed alpha
Helix 16
17
B
12 41Right-handed alpha
Helix 17
18
B
46 74Right-handed alpha
Helix 18
19
B
76 96Right-handed alpha
Helix 19
20
B
100 129Right-handed alpha
Helix 20
21
B
134 146Right-handed alpha
Helix 21
22
B
148 159Right-handed alpha
Helix 22
23
B
167 187Right-handed alpha
Helix 23
24
B
221 225Right-handed alpha
Helix 24
25
B
228 257Right-handed alpha
Helix 25
26
B
262 290Right-handed alpha
Helix 26
27
B
293 313Right-handed alpha
Helix 27
28
B
317 346Right-handed alpha
Helix 28
29
B
351 380Right-handed alpha
Helix 29
30
B
384 403Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6G9X.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
216 217first strand
Strand 2
A
410 411anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il