Analysis of interatomic Contacts of Structural Units in PDB entry:
6GBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GBO entry

There are 12 chains in PDB entry 6GBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 81HIS 153
B
 MET 81HIS 153
C
 MET 81GLU 147
D
 MET 81HIS 149
E
 MET 81HIS 153
F
 MET 81HIS 153
G
 SER 82HIS 153
H
 SER 82HIS 153
I
 SER 82GLU 147
J
 MET 81HIS 150
K
 SER 82HIS 153
L
 SER 82HIS 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6GBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 119Right-handed alpha
Helix 2
AA2
A
120 122Right-handed 310
Helix 3
AA3
A
123 141Right-handed alpha
Helix 4
AA4
A
142 152Right-handed alpha
Helix 5
AA5
B
82 153Right-handed alpha
Helix 6
AA6
C
82 117Right-handed alpha
Helix 7
AA7
C
118 127Right-handed alpha
Helix 8
AA8
C
127 147Right-handed alpha
Helix 9
AA9
D
82 117Right-handed alpha
Helix 10
AB1
D
118 126Right-handed alpha
Helix 11
AB2
D
127 146Right-handed alpha
Helix 12
AB3
E
82 119Right-handed alpha
Helix 13
AB4
E
120 122Right-handed 310
Helix 14
AB5
E
123 141Right-handed alpha
Helix 15
AB6
E
142 152Right-handed alpha
Helix 16
AB7
F
82 153Right-handed alpha
Helix 17
AB8
G
83 119Right-handed alpha
Helix 18
AB9
G
120 122Right-handed 310
Helix 19
AC1
G
123 141Right-handed alpha
Helix 20
AC2
G
142 152Right-handed alpha
Helix 21
AC3
H
83 153Right-handed alpha
Helix 22
AC4
I
83 117Right-handed alpha
Helix 23
AC5
I
118 127Right-handed alpha
Helix 24
AC6
I
127 146Right-handed alpha
Helix 25
AC7
J
82 84Right-handed 310
Helix 26
AC8
J
85 117Right-handed alpha
Helix 27
AC9
J
118 126Right-handed alpha
Helix 28
AD1
J
127 148Right-handed alpha
Helix 29
AD2
K
83 119Right-handed alpha
Helix 30
AD3
K
120 122Right-handed 310
Helix 31
AD4
K
123 141Right-handed alpha
Helix 32
AD5
K
142 152Right-handed alpha
Helix 33
AD6
L
83 153Right-handed alpha
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There are no sheets in PDB entry 6GBO
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