Analysis of interatomic Contacts of Structural Units in PDB entry:
6GCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GCT entry

There are 3 chains in PDB entry 6GCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 43THR 489
B
 ASP 43THR 489
C
 ASP 43THR 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 6GCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 52Right-handed alpha
Helix 2
AA2
A
52 76Right-handed alpha
Helix 3
AA3
A
85 89Right-handed 310
Helix 4
AA4
A
90 118Right-handed alpha
Helix 5
AA5
A
128 154Right-handed alpha
Helix 6
AA6
A
183 192Right-handed alpha
Helix 7
AA7
A
197 200Right-handed 310
Helix 8
AA8
A
234 249Right-handed alpha
Helix 9
AA9
A
250 252Right-handed 310
Helix 10
AB1
A
253 263Right-handed alpha
Helix 11
AB2
A
266 290Right-handed alpha
Helix 12
AB3
A
297 319Right-handed alpha
Helix 13
AB4
A
319 330Right-handed alpha
Helix 14
AB5
A
332 338Right-handed alpha
Helix 15
AB6
A
340 351Right-handed alpha
Helix 16
AB7
A
356 368Right-handed alpha
Helix 17
AB8
A
372 376Right-handed 310
Helix 18
AB9
A
378 383Right-handed alpha
Helix 19
AC1
A
387 398Right-handed alpha
Helix 20
AC2
A
399 405Right-handed alpha
Helix 21
AC3
A
410 424Right-handed alpha
Helix 22
AC4
A
434 441Right-handed alpha
Helix 23
AC5
A
441 446Right-handed alpha
Helix 24
AC6
A
449 452Right-handed 310
Helix 25
AC7
A
453 458Right-handed alpha
Helix 26
AC8
A
459 487Right-handed alpha
Helix 27
AC9
B
46 52Right-handed alpha
Helix 28
AD1
B
52 76Right-handed alpha
Helix 29
AD2
B
85 89Right-handed 310
Helix 30
AD3
B
90 118Right-handed alpha
Helix 31
AD4
B
128 154Right-handed alpha
Helix 32
AD5
B
183 192Right-handed alpha
Helix 33
AD6
B
197 200Right-handed 310
Helix 34
AD7
B
234 249Right-handed alpha
Helix 35
AD8
B
250 252Right-handed 310
Helix 36
AD9
B
253 263Right-handed alpha
Helix 37
AE1
B
266 290Right-handed alpha
Helix 38
AE2
B
297 319Right-handed alpha
Helix 39
AE3
B
319 330Right-handed alpha
Helix 40
AE4
B
332 338Right-handed alpha
Helix 41
AE5
B
340 351Right-handed alpha
Helix 42
AE6
B
356 368Right-handed alpha
Helix 43
AE7
B
372 376Right-handed 310
Helix 44
AE8
B
378 383Right-handed alpha
Helix 45
AE9
B
387 398Right-handed alpha
Helix 46
AF1
B
399 405Right-handed alpha
Helix 47
AF2
B
410 424Right-handed alpha
Helix 48
AF3
B
434 441Right-handed alpha
Helix 49
AF4
B
441 446Right-handed alpha
Helix 50
AF5
B
449 452Right-handed 310
Helix 51
AF6
B
453 458Right-handed alpha
Helix 52
AF7
B
459 487Right-handed alpha
Helix 53
AF8
C
46 52Right-handed alpha
Helix 54
AF9
C
52 76Right-handed alpha
Helix 55
AG1
C
85 89Right-handed 310
Helix 56
AG2
C
90 118Right-handed alpha
Helix 57
AG3
C
128 154Right-handed alpha
Helix 58
AG4
C
183 192Right-handed alpha
Helix 59
AG5
C
197 200Right-handed 310
Helix 60
AG6
C
234 249Right-handed alpha
Helix 61
AG7
C
250 252Right-handed 310
Helix 62
AG8
C
253 263Right-handed alpha
Helix 63
AG9
C
266 290Right-handed alpha
Helix 64
AH1
C
297 319Right-handed alpha
Helix 65
AH2
C
319 330Right-handed alpha
Helix 66
AH3
C
332 338Right-handed alpha
Helix 67
AH4
C
340 351Right-handed alpha
Helix 68
AH5
C
356 368Right-handed alpha
Helix 69
AH6
C
372 376Right-handed 310
Helix 70
AH7
C
378 383Right-handed alpha
Helix 71
AH8
C
387 398Right-handed alpha
Helix 72
AH9
C
399 405Right-handed alpha
Helix 73
AI1
C
410 424Right-handed alpha
Helix 74
AI2
C
434 441Right-handed alpha
Helix 75
AI3
C
441 446Right-handed alpha
Helix 76
AI4
C
449 452Right-handed 310
Helix 77
AI5
C
453 458Right-handed alpha
Helix 78
AI6
C
459 487Right-handed alpha
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There are 6 sheets in PDB entry 6GCT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
226 227anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
220 223anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
226 227anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 209first strand
Strand 2
B
220 223anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 203first strand
Strand 2
C
226 227anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 209first strand
Strand 2
C
220 223anti-parallel
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