Analysis of interatomic Contacts of Structural Units in PDB entry:
6GCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GCZ entry

There is 1 chain in PDB entry 6GCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1TYR 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6GCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
17 22Right-handed 310
Helix 3
AA3
A
27 35Right-handed alpha
Helix 4
AA4
A
49 57Right-handed alpha
Helix 5
AA5
A
67 87Right-handed alpha
Helix 6
AA6
A
88 90Right-handed 310
Helix 7
AA7
A
93 120Right-handed alpha
Helix 8
AA8
A
130 137Right-handed alpha
Helix 9
AA9
A
141 157Right-handed alpha
Helix 10
AB1
A
165 169Right-handed 310
Helix 11
AB2
A
173 188Right-handed alpha
Helix 12
AB3
A
190 203Right-handed alpha
Helix 13
AB4
A
218 224Right-handed 310
Helix 14
AB5
A
246 250Right-handed 310
Helix 15
AB6
A
259 264Right-handed alpha
Helix 16
AB7
A
289 297Right-handed alpha
Helix 17
AB8
A
301 305Right-handed alpha
Helix 18
AB9
A
309 315Right-handed alpha
Helix 19
AC1
A
333 335Right-handed 310
Helix 20
AC2
A
337 341Right-handed 310
Helix 21
AC3
A
347 351Right-handed 310
Helix 22
AC4
A
361 372Right-handed alpha
Helix 23
AC5
A
376 390Right-handed alpha
Helix 24
AC6
A
398 410Right-handed alpha
Helix 25
AC7
A
415 423Right-handed alpha
Helix 26
AC8
A
425 431Right-handed alpha
Helix 27
AC9
A
432 434Right-handed 310
Helix 28
AD1
A
446 450Right-handed 310
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There are 3 sheets in PDB entry 6GCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 237first strand
Strand 2
A
356 360anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 271first strand
Strand 2
A
318 321anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
329 331anti-parallel
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