Analysis of interatomic Contacts of Structural Units in PDB entry:
6GEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GEV entry

There are 2 chains in PDB entry 6GEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 731LYS 984
B
 LYS 1432GLU 1441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6GEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
738 746Right-handed alpha
Helix 2
AA2
A
761 786Right-handed alpha
Helix 3
AA3
A
789 793Right-handed 310
Helix 4
AA4
A
794 823Right-handed alpha
Helix 5
AA5
A
836 843Right-handed alpha
Helix 6
AA6
A
845 863Right-handed alpha
Helix 7
AA7
A
865 878Right-handed alpha
Helix 8
AA8
A
888 910Right-handed alpha
Helix 9
AA9
A
911 915Right-handed 310
Helix 10
AB1
A
916 949Right-handed alpha
Helix 11
AB2
A
957 973Right-handed alpha
Helix 12
AB3
B
1433 1441Right-handed alpha
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There are 2 sheets in PDB entry 6GEV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
827 830first strand
Strand 2
A
833 835anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
880 882first strand
Strand 2
A
976 978anti-parallel
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