Analysis of interatomic Contacts of Structural Units in PDB entry:
6GG6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6GG6 entry

There are 5 chains in PDB entry 6GG6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 22	LEU 473
A	LYS 475	PRO 531
B	MET 22	LEU 473
B	LYS 475	PRO 531
C	MET 22	LYS 305

There are168 helices in PDB entry 6GG6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	33	Right-handed alpha
Helix 2	AA2	A	57	68	Right-handed alpha
Helix 3	AA3	A	80	97	Right-handed alpha
Helix 4	AA4	A	145	149	Right-handed 310
Helix 5	AA5	A	163	168	Right-handed alpha
Helix 6	AA6	A	222	236	Right-handed alpha
Helix 7	AA7	A	247	259	Right-handed alpha
Helix 8	AA8	A	273	279	Right-handed alpha
Helix 9	AA9	A	279	287	Right-handed alpha
Helix 10	AB1	A	294	301	Right-handed alpha
Helix 11	AB2	A	305	321	Right-handed alpha
Helix 12	AB3	A	331	336	Right-handed 310
Helix 13	AB4	A	341	355	Right-handed alpha
Helix 14	AB5	A	362	367	Right-handed alpha
Helix 15	AB6	A	370	389	Right-handed alpha
Helix 16	AB7	A	390	401	Right-handed alpha
Helix 17	AB8	A	407	423	Right-handed alpha
Helix 18	AB9	A	435	443	Right-handed alpha
Helix 19	AC1	A	456	463	Right-handed alpha
Helix 20	AC2	A	464	466	Right-handed 310
Helix 21	AC3	A	481	500	Right-handed alpha
Helix 22	AC4	B	25	33	Right-handed alpha
Helix 23	AC5	B	57	68	Right-handed alpha
Helix 24	AC6	B	80	97	Right-handed alpha
Helix 25	AC7	B	145	149	Right-handed 310
Helix 26	AC8	B	163	168	Right-handed alpha
Helix 27	AC9	B	222	236	Right-handed alpha
Helix 28	AD1	B	247	259	Right-handed alpha
Helix 29	AD2	B	273	279	Right-handed alpha
Helix 30	AD3	B	279	287	Right-handed alpha
Helix 31	AD4	B	294	301	Right-handed alpha
Helix 32	AD5	B	305	321	Right-handed alpha
Helix 33	AD6	B	331	336	Right-handed 310
Helix 34	AD7	B	341	355	Right-handed alpha
Helix 35	AD8	B	362	367	Right-handed alpha
Helix 36	AD9	B	370	389	Right-handed alpha
Helix 37	AE1	B	390	401	Right-handed alpha
Helix 38	AE2	B	407	423	Right-handed alpha
Helix 39	AE3	B	435	443	Right-handed alpha
Helix 40	AE4	B	456	463	Right-handed alpha
Helix 41	AE5	B	464	466	Right-handed 310
Helix 42	AE6	B	481	500	Right-handed alpha
Helix 43	AE7	C	25	33	Right-handed alpha
Helix 44	AE8	C	57	68	Right-handed alpha
Helix 45	AE9	C	80	97	Right-handed alpha
Helix 46	AF1	C	145	149	Right-handed 310
Helix 47	AF2	C	163	168	Right-handed alpha
Helix 48	AF3	C	222	236	Right-handed alpha
Helix 49	AF4	C	247	259	Right-handed alpha
Helix 50	AF5	C	273	279	Right-handed alpha
Helix 51	AF6	C	279	287	Right-handed alpha
Helix 52	AF7	C	294	301	Right-handed alpha
Helix 53	AF8	C	305	321	Right-handed alpha
Helix 54	AF9	C	331	336	Right-handed 310
Helix 55	AG1	C	341	355	Right-handed alpha
Helix 56	AG2	C	362	367	Right-handed alpha
Helix 57	AG3	C	370	389	Right-handed alpha
Helix 58	AG4	C	390	401	Right-handed alpha
Helix 59	AG5	C	407	423	Right-handed alpha
Helix 60	AG6	C	435	443	Right-handed alpha
Helix 61	AG7	C	456	463	Right-handed alpha
Helix 62	AG8	C	464	466	Right-handed 310
Helix 63	AG9	C	481	500	Right-handed alpha
Helix 64	AH1	D	25	33	Right-handed alpha
Helix 65	AH2	D	57	68	Right-handed alpha
Helix 66	AH3	D	80	97	Right-handed alpha
Helix 67	AH4	D	145	149	Right-handed 310
Helix 68	AH5	D	163	168	Right-handed alpha
Helix 69	AH6	D	222	236	Right-handed alpha
Helix 70	AH7	D	247	259	Right-handed alpha
Helix 71	AH8	D	273	279	Right-handed alpha
Helix 72	AH9	D	279	287	Right-handed alpha
Helix 73	AI1	D	294	301	Right-handed alpha
Helix 74	AI2	D	305	321	Right-handed alpha
Helix 75	AI3	D	331	336	Right-handed 310
Helix 76	AI4	D	341	355	Right-handed alpha
Helix 77	AI5	D	362	367	Right-handed alpha
Helix 78	AI6	D	370	389	Right-handed alpha
Helix 79	AI7	D	390	401	Right-handed alpha
Helix 80	AI8	D	407	423	Right-handed alpha
Helix 81	AI9	D	435	443	Right-handed alpha
Helix 82	AJ1	D	456	463	Right-handed alpha
Helix 83	AJ2	D	464	466	Right-handed 310
Helix 84	AJ3	D	481	500	Right-handed alpha
Helix 85	AJ4	E	25	33	Right-handed alpha
Helix 86	AJ5	E	57	68	Right-handed alpha
Helix 87	AJ6	E	80	97	Right-handed alpha
Helix 88	AJ7	E	145	149	Right-handed 310
Helix 89	AJ8	E	163	168	Right-handed alpha
Helix 90	AJ9	E	222	236	Right-handed alpha
Helix 91	AK1	E	247	259	Right-handed alpha
Helix 92	AK2	E	273	279	Right-handed alpha
Helix 93	AK3	E	279	287	Right-handed alpha
Helix 94	AK4	E	294	301	Right-handed alpha
Helix 95	AK5	E	305	321	Right-handed alpha
Helix 96	AK6	E	331	336	Right-handed 310
Helix 97	AK7	E	341	355	Right-handed alpha
Helix 98	AK8	E	362	367	Right-handed alpha
Helix 99	AK9	E	370	389	Right-handed alpha
Helix 100	AL1	E	390	401	Right-handed alpha
Helix 101	AL2	E	407	423	Right-handed alpha
Helix 102	AL3	E	435	443	Right-handed alpha
Helix 103	AL4	E	456	463	Right-handed alpha
Helix 104	AL5	E	464	466	Right-handed 310
Helix 105	AL6	E	481	500	Right-handed alpha
Helix 106	AL7	F	25	33	Right-handed alpha
Helix 107	AL8	F	57	68	Right-handed alpha
Helix 108	AL9	F	80	97	Right-handed alpha
Helix 109	AM1	F	145	149	Right-handed 310
Helix 110	AM2	F	163	168	Right-handed alpha
Helix 111	AM3	F	222	236	Right-handed alpha
Helix 112	AM4	F	247	259	Right-handed alpha
Helix 113	AM5	F	273	279	Right-handed alpha
Helix 114	AM6	F	279	287	Right-handed alpha
Helix 115	AM7	F	294	301	Right-handed alpha
Helix 116	AM8	F	305	321	Right-handed alpha
Helix 117	AM9	F	331	336	Right-handed 310
Helix 118	AN1	F	341	355	Right-handed alpha
Helix 119	AN2	F	362	367	Right-handed alpha
Helix 120	AN3	F	370	389	Right-handed alpha
Helix 121	AN4	F	390	401	Right-handed alpha
Helix 122	AN5	F	407	423	Right-handed alpha
Helix 123	AN6	F	435	443	Right-handed alpha
Helix 124	AN7	F	456	463	Right-handed alpha
Helix 125	AN8	F	464	466	Right-handed 310
Helix 126	AN9	F	481	500	Right-handed alpha
Helix 127	AO1	G	25	33	Right-handed alpha
Helix 128	AO2	G	57	68	Right-handed alpha
Helix 129	AO3	G	80	97	Right-handed alpha
Helix 130	AO4	G	145	149	Right-handed 310
Helix 131	AO5	G	163	168	Right-handed alpha
Helix 132	AO6	G	222	236	Right-handed alpha
Helix 133	AO7	G	247	259	Right-handed alpha
Helix 134	AO8	G	273	279	Right-handed alpha
Helix 135	AO9	G	279	287	Right-handed alpha
Helix 136	AP1	G	294	301	Right-handed alpha
Helix 137	AP2	G	305	321	Right-handed alpha
Helix 138	AP3	G	331	336	Right-handed 310
Helix 139	AP4	G	341	355	Right-handed alpha
Helix 140	AP5	G	362	367	Right-handed alpha
Helix 141	AP6	G	370	389	Right-handed alpha
Helix 142	AP7	G	390	401	Right-handed alpha
Helix 143	AP8	G	407	423	Right-handed alpha
Helix 144	AP9	G	435	443	Right-handed alpha
Helix 145	AQ1	G	456	463	Right-handed alpha
Helix 146	AQ2	G	464	466	Right-handed 310
Helix 147	AQ3	G	481	500	Right-handed alpha
Helix 148	AQ4	H	25	33	Right-handed alpha
Helix 149	AQ5	H	57	68	Right-handed alpha
Helix 150	AQ6	H	80	97	Right-handed alpha
Helix 151	AQ7	H	145	149	Right-handed 310
Helix 152	AQ8	H	163	168	Right-handed alpha
Helix 153	AQ9	H	222	236	Right-handed alpha
Helix 154	AR1	H	247	259	Right-handed alpha
Helix 155	AR2	H	273	279	Right-handed alpha
Helix 156	AR3	H	279	287	Right-handed alpha
Helix 157	AR4	H	294	301	Right-handed alpha
Helix 158	AR5	H	305	321	Right-handed alpha
Helix 159	AR6	H	331	336	Right-handed 310
Helix 160	AR7	H	341	355	Right-handed alpha
Helix 161	AR8	H	362	367	Right-handed alpha
Helix 162	AR9	H	370	389	Right-handed alpha
Helix 163	AS1	H	390	401	Right-handed alpha
Helix 164	AS2	H	407	423	Right-handed alpha
Helix 165	AS3	H	435	443	Right-handed alpha
Helix 166	AS4	H	456	463	Right-handed alpha
Helix 167	AS5	H	464	466	Right-handed 310
Helix 168	AS6	H	481	500	Right-handed alpha

There are 28 sheets in PDB entry 6GG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	50	first strand
Strand 2	A	71	75	parallel
Strand 3	A	109	113	parallel
Strand 4	A	239	242	parallel
Strand 5	A	266	271	parallel
Strand 6	A	289	293	parallel
Strand 7	A	324	327	parallel
Strand 8	A	358	361	parallel
Strand 9	A	46	50	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	134	first strand
Strand 2	A	201	203	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	158	first strand
Strand 2	A	139	143	parallel
Strand 3	A	192	199	anti-parallel
Strand 4	A	181	188	anti-parallel
Strand 5	A	173	176	anti-parallel
Strand 6	A	209	210	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	473	first strand
Strand 2	A	450	454	parallel
Strand 3	A	428	431	parallel
Strand 4	A	508	513	parallel
Strand 5	A	524	529	anti-parallel
Strand 6	D	524	529	anti-parallel
Strand 7	D	508	513	anti-parallel
Strand 8	D	428	431	parallel
Strand 9	D	450	454	parallel
Strand 10	D	469	473	parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	50	first strand
Strand 2	B	71	75	parallel
Strand 3	B	109	113	parallel
Strand 4	B	239	242	parallel
Strand 5	B	266	271	parallel
Strand 6	B	289	293	parallel
Strand 7	B	324	327	parallel
Strand 8	B	358	361	parallel
Strand 9	B	46	50	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	134	first strand
Strand 2	B	201	203	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	139	143	parallel
Strand 3	B	192	199	anti-parallel
Strand 4	B	181	188	anti-parallel
Strand 5	B	173	176	anti-parallel
Strand 6	B	209	210	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	473	first strand
Strand 2	B	450	454	parallel
Strand 3	B	428	431	parallel
Strand 4	B	508	513	parallel
Strand 5	B	524	529	anti-parallel
Strand 6	C	524	529	anti-parallel
Strand 7	C	508	513	anti-parallel
Strand 8	C	428	431	parallel
Strand 9	C	450	454	parallel
Strand 10	C	469	473	parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	50	first strand
Strand 2	C	71	75	parallel
Strand 3	C	109	113	parallel
Strand 4	C	239	242	parallel
Strand 5	C	266	271	parallel
Strand 6	C	289	293	parallel
Strand 7	C	324	327	parallel
Strand 8	C	358	361	parallel
Strand 9	C	46	50	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	134	first strand
Strand 2	C	201	203	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	158	first strand
Strand 2	C	139	143	parallel
Strand 3	C	192	199	anti-parallel
Strand 4	C	181	188	anti-parallel
Strand 5	C	173	176	anti-parallel
Strand 6	C	209	210	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	50	first strand
Strand 2	D	71	75	parallel
Strand 3	D	109	113	parallel
Strand 4	D	239	242	parallel
Strand 5	D	266	271	parallel
Strand 6	D	289	293	parallel
Strand 7	D	324	327	parallel
Strand 8	D	358	361	parallel
Strand 9	D	46	50	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	134	first strand
Strand 2	D	201	203	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	158	first strand
Strand 2	D	139	143	parallel
Strand 3	D	192	199	anti-parallel
Strand 4	D	181	188	anti-parallel
Strand 5	D	173	176	anti-parallel
Strand 6	D	209	210	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	50	first strand
Strand 2	E	71	75	parallel
Strand 3	E	109	113	parallel
Strand 4	E	239	242	parallel
Strand 5	E	266	271	parallel
Strand 6	E	289	293	parallel
Strand 7	E	324	327	parallel
Strand 8	E	358	361	parallel
Strand 9	E	46	50	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	132	134	first strand
Strand 2	E	201	203	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	156	158	first strand
Strand 2	E	139	143	parallel
Strand 3	E	192	199	anti-parallel
Strand 4	E	181	188	anti-parallel
Strand 5	E	173	176	anti-parallel
Strand 6	E	209	210	anti-parallel

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There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	469	473	first strand
Strand 2	E	450	454	parallel
Strand 3	E	428	431	parallel
Strand 4	E	508	513	parallel
Strand 5	E	524	529	anti-parallel
Strand 6	G	524	529	anti-parallel
Strand 7	G	508	513	anti-parallel
Strand 8	G	428	431	parallel
Strand 9	G	450	454	parallel
Strand 10	G	469	473	parallel

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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	50	first strand
Strand 2	F	71	75	parallel
Strand 3	F	109	113	parallel
Strand 4	F	239	242	parallel
Strand 5	F	266	271	parallel
Strand 6	F	289	293	parallel
Strand 7	F	324	327	parallel
Strand 8	F	358	361	parallel
Strand 9	F	46	50	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	134	first strand
Strand 2	F	201	203	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	156	158	first strand
Strand 2	F	139	143	parallel
Strand 3	F	192	199	anti-parallel
Strand 4	F	181	188	anti-parallel
Strand 5	F	173	176	anti-parallel
Strand 6	F	209	210	anti-parallel

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There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	469	473	first strand
Strand 2	F	450	454	parallel
Strand 3	F	428	431	parallel
Strand 4	F	508	513	parallel
Strand 5	F	524	529	anti-parallel
Strand 6	H	524	529	anti-parallel
Strand 7	H	508	513	anti-parallel
Strand 8	H	428	431	parallel
Strand 9	H	450	454	parallel
Strand 10	H	469	473	parallel

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There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	50	first strand
Strand 2	G	71	75	parallel
Strand 3	G	109	113	parallel
Strand 4	G	239	242	parallel
Strand 5	G	266	271	parallel
Strand 6	G	289	293	parallel
Strand 7	G	324	327	parallel
Strand 8	G	358	361	parallel
Strand 9	G	46	50	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	132	134	first strand
Strand 2	G	201	203	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	156	158	first strand
Strand 2	G	139	143	parallel
Strand 3	G	192	199	anti-parallel
Strand 4	G	181	188	anti-parallel
Strand 5	G	173	176	anti-parallel
Strand 6	G	209	210	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	46	50	first strand
Strand 2	H	71	75	parallel
Strand 3	H	109	113	parallel
Strand 4	H	239	242	parallel
Strand 5	H	266	271	parallel
Strand 6	H	289	293	parallel
Strand 7	H	324	327	parallel
Strand 8	H	358	361	parallel
Strand 9	H	46	50	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	134	first strand
Strand 2	H	201	203	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	158	first strand
Strand 2	H	139	143	parallel
Strand 3	H	192	199	anti-parallel
Strand 4	H	181	188	anti-parallel
Strand 5	H	173	176	anti-parallel
Strand 6	H	209	210	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6GG6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6GG6