Analysis of interatomic Contacts of Structural Units in PDB entry:
6GGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GGS entry

There are 10 chains in PDB entry 6GGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 PRO 433GLN 518
A
 PRO 433GLN 518
B
 PRO 433GLN 518
C
 PRO 433GLN 518
D
 PRO 433GLN 518
E
 PRO 433GLN 518
G
 PRO 433GLN 518
H
 PRO 433GLN 518
I
 PRO 433GLN 518
J
 PRO 433GLN 518
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 6GGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
435 439Right-handed 310
Helix 2
AA2
F
443 449Right-handed alpha
Helix 3
AA3
F
452 461Right-handed alpha
Helix 4
AA4
F
462 465Right-handed 310
Helix 5
AA5
F
473 478Right-handed alpha
Helix 6
AA6
F
482 487Right-handed alpha
Helix 7
AA7
F
487 497Right-handed alpha
Helix 8
AA8
F
498 506Right-handed alpha
Helix 9
AA9
A
435 439Right-handed 310
Helix 10
AB1
A
443 449Right-handed alpha
Helix 11
AB2
A
452 461Right-handed alpha
Helix 12
AB3
A
462 465Right-handed 310
Helix 13
AB4
A
473 478Right-handed alpha
Helix 14
AB5
A
482 487Right-handed alpha
Helix 15
AB6
A
487 497Right-handed alpha
Helix 16
AB7
A
498 506Right-handed alpha
Helix 17
AB8
B
435 439Right-handed 310
Helix 18
AB9
B
443 449Right-handed alpha
Helix 19
AC1
B
452 461Right-handed alpha
Helix 20
AC2
B
462 465Right-handed 310
Helix 21
AC3
B
473 478Right-handed alpha
Helix 22
AC4
B
482 487Right-handed alpha
Helix 23
AC5
B
487 497Right-handed alpha
Helix 24
AC6
B
498 506Right-handed alpha
Helix 25
AC7
C
435 439Right-handed 310
Helix 26
AC8
C
443 449Right-handed alpha
Helix 27
AC9
C
452 461Right-handed alpha
Helix 28
AD1
C
462 465Right-handed 310
Helix 29
AD2
C
473 478Right-handed alpha
Helix 30
AD3
C
482 487Right-handed alpha
Helix 31
AD4
C
487 497Right-handed alpha
Helix 32
AD5
C
498 506Right-handed alpha
Helix 33
AD6
D
435 439Right-handed 310
Helix 34
AD7
D
443 449Right-handed alpha
Helix 35
AD8
D
452 461Right-handed alpha
Helix 36
AD9
D
462 465Right-handed 310
Helix 37
AE1
D
473 478Right-handed alpha
Helix 38
AE2
D
482 487Right-handed alpha
Helix 39
AE3
D
487 497Right-handed alpha
Helix 40
AE4
D
498 506Right-handed alpha
Helix 41
AE5
E
435 439Right-handed 310
Helix 42
AE6
E
443 449Right-handed alpha
Helix 43
AE7
E
452 461Right-handed alpha
Helix 44
AE8
E
462 465Right-handed 310
Helix 45
AE9
E
473 478Right-handed alpha
Helix 46
AF1
E
482 487Right-handed alpha
Helix 47
AF2
E
487 497Right-handed alpha
Helix 48
AF3
E
498 506Right-handed alpha
Helix 49
AF4
G
435 439Right-handed 310
Helix 50
AF5
G
443 449Right-handed alpha
Helix 51
AF6
G
452 461Right-handed alpha
Helix 52
AF7
G
462 465Right-handed 310
Helix 53
AF8
G
473 478Right-handed alpha
Helix 54
AF9
G
482 487Right-handed alpha
Helix 55
AG1
G
487 497Right-handed alpha
Helix 56
AG2
G
498 506Right-handed alpha
Helix 57
AG3
H
435 439Right-handed 310
Helix 58
AG4
H
443 449Right-handed alpha
Helix 59
AG5
H
452 461Right-handed alpha
Helix 60
AG6
H
462 465Right-handed 310
Helix 61
AG7
H
473 478Right-handed alpha
Helix 62
AG8
H
482 487Right-handed alpha
Helix 63
AG9
H
487 497Right-handed alpha
Helix 64
AH1
H
498 506Right-handed alpha
Helix 65
AH2
I
435 439Right-handed 310
Helix 66
AH3
I
443 449Right-handed alpha
Helix 67
AH4
I
452 461Right-handed alpha
Helix 68
AH5
I
462 465Right-handed 310
Helix 69
AH6
I
473 478Right-handed alpha
Helix 70
AH7
I
482 487Right-handed alpha
Helix 71
AH8
I
487 497Right-handed alpha
Helix 72
AH9
I
498 506Right-handed alpha
Helix 73
AI1
J
435 439Right-handed 310
Helix 74
AI2
J
443 449Right-handed alpha
Helix 75
AI3
J
452 461Right-handed alpha
Helix 76
AI4
J
462 465Right-handed 310
Helix 77
AI5
J
473 478Right-handed alpha
Helix 78
AI6
J
482 487Right-handed alpha
Helix 79
AI7
J
487 497Right-handed alpha
Helix 80
AI8
J
498 506Right-handed alpha
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There are no sheets in PDB entry 6GGS
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