Analysis of interatomic Contacts of Structural Units in PDB entry:
6GHU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GHU entry

There are 2 chains in PDB entry 6GHU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 304GLY 381
A
 GLN 304GLY 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6GHU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
305 318Right-handed alpha
Helix 2
AA2
B
344 358Right-handed alpha
Helix 3
AA3
A
305 318Right-handed alpha
Helix 4
AA4
A
344 358Right-handed alpha
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There are 2 sheets in PDB entry 6GHU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 364first strand
Strand 2
B
373 380anti-parallel
Strand 3
B
335 342anti-parallel
Strand 4
B
323 330anti-parallel
Strand 5
A
323 330anti-parallel
Strand 6
A
336 342anti-parallel
Strand 7
A
373 380anti-parallel
Strand 8
A
362 364anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 370first strand
Strand 2
B
373 380anti-parallel
Strand 3
B
335 342anti-parallel
Strand 4
B
323 330anti-parallel
Strand 5
A
323 330anti-parallel
Strand 6
A
336 342anti-parallel
Strand 7
A
373 380anti-parallel
Strand 8
A
368 370anti-parallel
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