Analysis of interatomic Contacts of Structural Units in PDB entry:
6GI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GI1 entry

There are 2 chains in PDB entry 6GI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11GLU 276
B
 ALA 6ARG 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6GI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 66Right-handed alpha
Helix 2
AA2
A
68 76Right-handed alpha
Helix 3
AA3
A
95 104Right-handed alpha
Helix 4
AA4
A
124 135Right-handed alpha
Helix 5
AA5
A
135 144Right-handed alpha
Helix 6
AA6
A
157 170Right-handed alpha
Helix 7
AA7
A
185 188Right-handed 310
Helix 8
AA8
A
189 195Right-handed alpha
Helix 9
AA9
A
197 202Right-handed alpha
Helix 10
AB1
A
230 241Right-handed alpha
Helix 11
AB2
A
260 272Right-handed alpha
Helix 12
AB3
B
10 15Right-handed alpha
Helix 13
AB4
B
59 66Right-handed alpha
Helix 14
AB5
B
68 76Right-handed alpha
Helix 15
AB6
B
95 103Right-handed alpha
Helix 16
AB7
B
124 135Right-handed alpha
Helix 17
AB8
B
135 144Right-handed alpha
Helix 18
AB9
B
157 170Right-handed alpha
Helix 19
AC1
B
185 194Right-handed alpha
Helix 20
AC2
B
197 202Right-handed alpha
Helix 21
AC3
B
230 241Right-handed alpha
Helix 22
AC4
B
260 272Right-handed alpha
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There are 2 sheets in PDB entry 6GI1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 28first strand
Strand 2
A
35 43anti-parallel
Strand 3
A
82 88anti-parallel
Strand 4
A
52 57parallel
Strand 5
A
146 156parallel
Strand 6
A
176 180parallel
Strand 7
A
207 214parallel
Strand 8
A
246 253parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 28first strand
Strand 2
B
35 43anti-parallel
Strand 3
B
82 88anti-parallel
Strand 4
B
52 57parallel
Strand 5
B
146 156parallel
Strand 6
B
176 180parallel
Strand 7
B
207 214parallel
Strand 8
B
246 253parallel
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