Analysis of interatomic Contacts of Structural Units in PDB entry:
6GIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GIE entry

There is 1 chain in PDB entry 6GIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -3PHE 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6GIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 39Right-handed 310
Helix 2
AA2
A
40 42Right-handed 310
Helix 3
AA3
A
43 48Right-handed alpha
Helix 4
AA4
A
222 225Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6GIE.

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
0 13first strand
Strand 2
A
21 35anti-parallel
Strand 3
A
52 61anti-parallel
Strand 4
A
72 83anti-parallel
Strand 5
A
90 100anti-parallel
Strand 6
A
113 124anti-parallel
Strand 7
A
127 135anti-parallel
Strand 8
A
168 178anti-parallel
Strand 9
A
185 194anti-parallel
Strand 10
A
198 209anti-parallel
Strand 11
A
212 220anti-parallel
Strand 12
A
230 241anti-parallel
Strand 13
A
244 254anti-parallel
Strand 14
A
263 273anti-parallel
Strand 15
A
0 13anti-parallel
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