Analysis of interatomic Contacts of Structural Units in PDB entry:
6GK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GK6 entry

There is 1 chain in PDB entry 6GK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6HIS 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6GK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
12 18Right-handed alpha
Helix 3
AA3
A
19 30Right-handed alpha
Helix 4
AA4
A
49 59Right-handed alpha
Helix 5
AA5
A
65 69Right-handed 310
Helix 6
AA6
A
70 78Right-handed alpha
Helix 7
AA7
A
80 83Right-handed 310
Helix 8
AA8
A
84 89Right-handed alpha
Helix 9
AA9
A
90 94Right-handed 310
Helix 10
AB1
A
97 107Right-handed alpha
Helix 11
AB2
A
108 110Right-handed 310
Helix 12
AB3
A
111 132Right-handed alpha
Helix 13
AB4
A
141 145Right-handed alpha
Helix 14
AB5
A
147 159Right-handed alpha
Helix 15
AB6
A
161 163Right-handed 310
Helix 16
AB7
A
164 176Right-handed alpha
Helix 17
AB8
A
181 209Right-handed alpha
Helix 18
AB9
A
213 224Right-handed alpha
Helix 19
AC1
A
229 260Right-handed alpha
Helix 20
AC2
A
262 272Right-handed alpha
Helix 21
AC3
A
275 288Right-handed alpha
Helix 22
AC4
A
318 323Right-handed alpha
Helix 23
AC5
A
349 353Right-handed 310
Helix 24
AC6
A
356 375Right-handed alpha
Helix 25
AC7
A
383 387Right-handed 310
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There are 3 sheets in PDB entry 6GK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
314 317parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 140first strand
Strand 2
A
402 404anti-parallel
Strand 3
A
379 380anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
307 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il