Analysis of interatomic Contacts of Structural Units in PDB entry:
6GL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GL0 entry

There are 3 chains in PDB entry 6GL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 55LYS 385
B
 SER 55LYS 385
C
 SER 55LYS 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6GL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 69Right-handed alpha
Helix 2
AA2
A
95 106Right-handed alpha
Helix 3
AA3
A
116 120Right-handed 310
Helix 4
AA4
A
129 145Right-handed alpha
Helix 5
AA5
A
157 161Right-handed 310
Helix 6
AA6
A
167 186Right-handed alpha
Helix 7
AA7
A
214 235Right-handed alpha
Helix 8
AA8
A
236 241Right-handed 310
Helix 9
AA9
A
249 252Right-handed 310
Helix 10
AB1
A
254 260Right-handed alpha
Helix 11
AB2
A
263 267Right-handed 310
Helix 12
AB3
A
279 284Right-handed alpha
Helix 13
AB4
A
293 312Right-handed alpha
Helix 14
AB5
A
331 349Right-handed alpha
Helix 15
AB6
A
376 385Right-handed alpha
Helix 16
AB7
B
61 69Right-handed alpha
Helix 17
AB8
B
95 106Right-handed alpha
Helix 18
AB9
B
116 120Right-handed 310
Helix 19
AC1
B
129 146Right-handed alpha
Helix 20
AC2
B
157 161Right-handed 310
Helix 21
AC3
B
164 186Right-handed alpha
Helix 22
AC4
B
214 235Right-handed alpha
Helix 23
AC5
B
236 241Right-handed 310
Helix 24
AC6
B
249 252Right-handed 310
Helix 25
AC7
B
254 260Right-handed alpha
Helix 26
AC8
B
263 267Right-handed 310
Helix 27
AC9
B
279 284Right-handed alpha
Helix 28
AD1
B
293 312Right-handed alpha
Helix 29
AD2
B
331 349Right-handed alpha
Helix 30
AD3
B
376 385Right-handed alpha
Helix 31
AD4
C
61 69Right-handed alpha
Helix 32
AD5
C
95 106Right-handed alpha
Helix 33
AD6
C
116 120Right-handed 310
Helix 34
AD7
C
129 146Right-handed alpha
Helix 35
AD8
C
157 161Right-handed 310
Helix 36
AD9
C
167 186Right-handed alpha
Helix 37
AE1
C
214 235Right-handed alpha
Helix 38
AE2
C
236 241Right-handed 310
Helix 39
AE3
C
249 252Right-handed 310
Helix 40
AE4
C
254 260Right-handed alpha
Helix 41
AE5
C
263 267Right-handed 310
Helix 42
AE6
C
279 284Right-handed alpha
Helix 43
AE7
C
293 312Right-handed alpha
Helix 44
AE8
C
331 349Right-handed alpha
Helix 45
AE9
C
376 385Right-handed alpha
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There are 3 sheets in PDB entry 6GL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
109 112parallel
Strand 3
A
149 153parallel
Strand 4
A
193 196parallel
Strand 5
A
244 247parallel
Strand 6
A
270 275parallel
Strand 7
A
319 324parallel
Strand 8
A
352 355parallel
Strand 9
A
72 74parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 74first strand
Strand 2
B
109 112parallel
Strand 3
B
149 153parallel
Strand 4
B
193 196parallel
Strand 5
B
244 247parallel
Strand 6
B
270 275parallel
Strand 7
B
319 324parallel
Strand 8
B
352 355parallel
Strand 9
B
72 74parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 74first strand
Strand 2
C
109 112parallel
Strand 3
C
149 153parallel
Strand 4
C
193 196parallel
Strand 5
C
244 247parallel
Strand 6
C
270 275parallel
Strand 7
C
319 324parallel
Strand 8
C
352 355parallel
Strand 9
C
72 74parallel
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