Analysis of interatomic Contacts of Structural Units in PDB entry:
6GL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GL6 entry

There is 1 chain in PDB entry 6GL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 25VAL 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6GL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 37Right-handed alpha
Helix 2
AA2
A
52 59Right-handed alpha
Helix 3
AA3
A
60 64Right-handed 310
Helix 4
AA4
A
71 82Right-handed alpha
Helix 5
AA5
A
90 115Right-handed alpha
Helix 6
AA6
A
130 141Right-handed alpha
Helix 7
AA7
A
142 148Right-handed 310
Helix 8
AA8
A
153 163Right-handed alpha
Helix 9
AA9
A
164 171Right-handed alpha
Helix 10
AB1
A
173 175Right-handed 310
Helix 11
AB2
A
187 193Right-handed alpha
Helix 12
AB3
A
214 224Right-handed alpha
Helix 13
AB4
A
227 231Right-handed 310
Helix 14
AB5
A
255 270Right-handed alpha
Helix 15
AB6
A
300 307Right-handed alpha
Helix 16
AB7
A
351 364Right-handed alpha
Helix 17
AB8
A
379 384Right-handed 310
Helix 18
AB9
A
394 403Right-handed alpha
Helix 19
AC1
A
405 410Right-handed alpha
Helix 20
AC2
A
414 417Right-handed 310
Helix 21
AC3
A
418 428Right-handed alpha
Helix 22
AC4
A
434 442Right-handed alpha
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There are 4 sheets in PDB entry 6GL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
46 51parallel
Strand 3
A
177 183parallel
Strand 4
A
210 213parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
371 375parallel
Strand 3
A
341 350parallel
Strand 4
A
287 294anti-parallel
Strand 5
A
279 280anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
371 375parallel
Strand 3
A
341 350parallel
Strand 4
A
331 333anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
202 206anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il