Analysis of interatomic Contacts of Structural Units in PDB entry:
6GO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GO5 entry

There are 8 chains in PDB entry 6GO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 149ALA 511
B
 LYS 149ALA 511
H
 C 1 A 12
F
 T 1 G 6
G
 A 1 G 6
L
 T 1 G 6
N
 C 1 A 12
M
 A 1 G 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6GO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
153 157Right-handed 310
Helix 2
AA2
A
165 182Right-handed alpha
Helix 3
AA3
A
184 201Right-handed alpha
Helix 4
AA4
A
207 211Right-handed 310
Helix 5
AA5
A
218 232Right-handed alpha
Helix 6
AA6
A
234 242Right-handed alpha
Helix 7
AA7
A
243 253Right-handed alpha
Helix 8
AA8
A
259 270Right-handed alpha
Helix 9
AA9
A
273 279Right-handed alpha
Helix 10
AB1
A
286 295Right-handed alpha
Helix 11
AB2
A
295 301Right-handed alpha
Helix 12
AB3
A
305 323Right-handed alpha
Helix 13
AB4
A
332 336Right-handed alpha
Helix 14
AB5
A
357 359Right-handed 310
Helix 15
AB6
A
360 372Right-handed alpha
Helix 16
AB7
A
414 416Right-handed 310
Helix 17
AB8
A
440 442Right-handed 310
Helix 18
AB9
A
443 453Right-handed alpha
Helix 19
AC1
A
454 470Right-handed alpha
Helix 20
AC2
A
491 499Right-handed alpha
Helix 21
AC3
A
505 509Right-handed 310
Helix 22
AC4
B
153 157Right-handed 310
Helix 23
AC5
B
165 182Right-handed alpha
Helix 24
AC6
B
184 201Right-handed alpha
Helix 25
AC7
B
207 212Right-handed 310
Helix 26
AC8
B
218 231Right-handed alpha
Helix 27
AC9
B
234 242Right-handed alpha
Helix 28
AD1
B
243 254Right-handed alpha
Helix 29
AD2
B
259 270Right-handed alpha
Helix 30
AD3
B
273 279Right-handed alpha
Helix 31
AD4
B
286 295Right-handed alpha
Helix 32
AD5
B
295 301Right-handed alpha
Helix 33
AD6
B
305 323Right-handed alpha
Helix 34
AD7
B
332 336Right-handed alpha
Helix 35
AD8
B
357 359Right-handed 310
Helix 36
AD9
B
360 372Right-handed alpha
Helix 37
AE1
B
414 416Right-handed 310
Helix 38
AE2
B
440 442Right-handed 310
Helix 39
AE3
B
443 453Right-handed alpha
Helix 40
AE4
B
454 470Right-handed alpha
Helix 41
AE5
B
491 499Right-handed alpha
Helix 42
AE6
B
505 509Right-handed 310
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There are 6 sheets in PDB entry 6GO5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
340 341anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 331first strand
Strand 2
A
344 349anti-parallel
Strand 3
A
429 438parallel
Strand 4
A
403 412anti-parallel
Strand 5
A
375 382anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 473first strand
Strand 2
A
478 480anti-parallel
Strand 3
A
485 486anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 304first strand
Strand 2
B
340 341anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 331first strand
Strand 2
B
344 349anti-parallel
Strand 3
B
429 438parallel
Strand 4
B
403 412anti-parallel
Strand 5
B
375 381anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
471 473first strand
Strand 2
B
478 480anti-parallel
Strand 3
B
485 486anti-parallel
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