Analysis of interatomic Contacts of Structural Units in PDB entry:
6GO6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GO6 entry

There are 4 chains in PDB entry 6GO6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 148ALA 511
G
 T 1 C 8
F
 T 1 C 8
E
 A 1 C 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6GO6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
153 157Right-handed 310
Helix 2
AA2
A
165 182Right-handed alpha
Helix 3
AA3
A
184 200Right-handed alpha
Helix 4
AA4
A
207 212Right-handed 310
Helix 5
AA5
A
218 232Right-handed alpha
Helix 6
AA6
A
234 243Right-handed alpha
Helix 7
AA7
A
243 253Right-handed alpha
Helix 8
AA8
A
259 269Right-handed alpha
Helix 9
AA9
A
273 279Right-handed alpha
Helix 10
AB1
A
286 295Right-handed alpha
Helix 11
AB2
A
295 301Right-handed alpha
Helix 12
AB3
A
305 323Right-handed alpha
Helix 13
AB4
A
331 336Right-handed alpha
Helix 14
AB5
A
354 372Right-handed alpha
Helix 15
AB6
A
382 384Right-handed 310
Helix 16
AB7
A
387 391Right-handed 310
Helix 17
AB8
A
395 401Right-handed alpha
Helix 18
AB9
A
414 416Right-handed 310
Helix 19
AC1
A
440 442Right-handed 310
Helix 20
AC2
A
443 453Right-handed alpha
Helix 21
AC3
A
454 470Right-handed alpha
Helix 22
AC4
A
491 499Right-handed alpha
Helix 23
AC5
A
505 509Right-handed 310
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There are 3 sheets in PDB entry 6GO6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
340 341anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 330first strand
Strand 2
A
344 349anti-parallel
Strand 3
A
429 438parallel
Strand 4
A
403 412anti-parallel
Strand 5
A
375 380anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 473first strand
Strand 2
A
478 480anti-parallel
Strand 3
A
485 487anti-parallel
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