Analysis of interatomic Contacts of Structural Units in PDB entry:
6GOU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6GOU entry

There are 4 chains in PDB entry 6GOU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLY 81	LEU 658
A	GLY 81	LEU 658
B	GLY 81	LEU 658
C	GLY 81	LEU 658

There are 88 helices in PDB entry 6GOU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	86	90	Right-handed 310
Helix 2	AA2	D	127	137	Right-handed alpha
Helix 3	AA3	D	161	170	Right-handed alpha
Helix 4	AA4	D	178	185	Right-handed alpha
Helix 5	AA5	D	190	199	Right-handed alpha
Helix 6	AA6	D	214	228	Right-handed alpha
Helix 7	AA7	D	283	293	Right-handed alpha
Helix 8	AA8	D	309	317	Right-handed alpha
Helix 9	AA9	D	322	327	Right-handed alpha
Helix 10	AB1	D	328	332	Right-handed alpha
Helix 11	AB2	D	360	365	Right-handed alpha
Helix 12	AB3	D	397	411	Right-handed alpha
Helix 13	AB4	D	422	431	Right-handed alpha
Helix 14	AB5	D	473	490	Right-handed alpha
Helix 15	AB6	D	497	507	Right-handed alpha
Helix 16	AB7	D	508	512	Right-handed 310
Helix 17	AB8	D	513	521	Right-handed alpha
Helix 18	AB9	D	536	555	Right-handed alpha
Helix 19	AC1	D	590	609	Right-handed alpha
Helix 20	AC2	D	623	625	Right-handed 310
Helix 21	AC3	D	626	632	Right-handed alpha
Helix 22	AC4	D	632	647	Right-handed alpha
Helix 23	AC5	A	86	90	Right-handed 310
Helix 24	AC6	A	127	137	Right-handed alpha
Helix 25	AC7	A	161	170	Right-handed alpha
Helix 26	AC8	A	178	185	Right-handed alpha
Helix 27	AC9	A	190	200	Right-handed alpha
Helix 28	AD1	A	214	228	Right-handed alpha
Helix 29	AD2	A	283	293	Right-handed alpha
Helix 30	AD3	A	309	317	Right-handed alpha
Helix 31	AD4	A	322	327	Right-handed alpha
Helix 32	AD5	A	328	332	Right-handed alpha
Helix 33	AD6	A	360	365	Right-handed alpha
Helix 34	AD7	A	397	411	Right-handed alpha
Helix 35	AD8	A	422	431	Right-handed alpha
Helix 36	AD9	A	473	490	Right-handed alpha
Helix 37	AE1	A	497	507	Right-handed alpha
Helix 38	AE2	A	508	512	Right-handed 310
Helix 39	AE3	A	513	521	Right-handed alpha
Helix 40	AE4	A	536	555	Right-handed alpha
Helix 41	AE5	A	590	609	Right-handed alpha
Helix 42	AE6	A	623	625	Right-handed 310
Helix 43	AE7	A	626	632	Right-handed alpha
Helix 44	AE8	A	632	647	Right-handed alpha
Helix 45	AE9	B	86	90	Right-handed 310
Helix 46	AF1	B	127	137	Right-handed alpha
Helix 47	AF2	B	161	170	Right-handed alpha
Helix 48	AF3	B	178	185	Right-handed alpha
Helix 49	AF4	B	190	199	Right-handed alpha
Helix 50	AF5	B	214	228	Right-handed alpha
Helix 51	AF6	B	283	293	Right-handed alpha
Helix 52	AF7	B	309	317	Right-handed alpha
Helix 53	AF8	B	322	327	Right-handed alpha
Helix 54	AF9	B	328	332	Right-handed alpha
Helix 55	AG1	B	360	365	Right-handed alpha
Helix 56	AG2	B	397	411	Right-handed alpha
Helix 57	AG3	B	422	431	Right-handed alpha
Helix 58	AG4	B	473	490	Right-handed alpha
Helix 59	AG5	B	497	507	Right-handed alpha
Helix 60	AG6	B	508	512	Right-handed 310
Helix 61	AG7	B	513	521	Right-handed alpha
Helix 62	AG8	B	536	555	Right-handed alpha
Helix 63	AG9	B	590	609	Right-handed alpha
Helix 64	AH1	B	623	625	Right-handed 310
Helix 65	AH2	B	626	632	Right-handed alpha
Helix 66	AH3	B	632	647	Right-handed alpha
Helix 67	AH4	C	86	90	Right-handed 310
Helix 68	AH5	C	127	137	Right-handed alpha
Helix 69	AH6	C	161	170	Right-handed alpha
Helix 70	AH7	C	178	185	Right-handed alpha
Helix 71	AH8	C	190	199	Right-handed alpha
Helix 72	AH9	C	214	228	Right-handed alpha
Helix 73	AI1	C	283	293	Right-handed alpha
Helix 74	AI2	C	309	317	Right-handed alpha
Helix 75	AI3	C	322	327	Right-handed alpha
Helix 76	AI4	C	328	332	Right-handed alpha
Helix 77	AI5	C	360	365	Right-handed alpha
Helix 78	AI6	C	397	411	Right-handed alpha
Helix 79	AI7	C	422	431	Right-handed alpha
Helix 80	AI8	C	473	490	Right-handed alpha
Helix 81	AI9	C	497	507	Right-handed alpha
Helix 82	AJ1	C	508	512	Right-handed 310
Helix 83	AJ2	C	513	521	Right-handed alpha
Helix 84	AJ3	C	536	555	Right-handed alpha
Helix 85	AJ4	C	590	609	Right-handed alpha
Helix 86	AJ5	C	623	625	Right-handed 310
Helix 87	AJ6	C	626	632	Right-handed alpha
Helix 88	AJ7	C	632	647	Right-handed alpha

There are 20 sheets in PDB entry 6GOU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	111	113	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	176	first strand
Strand 2	D	208	211	anti-parallel
Strand 3	D	255	259	parallel
Strand 4	D	231	235	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	270	first strand
Strand 2	D	275	279	anti-parallel
Strand 3	D	373	380	anti-parallel
Strand 4	D	333	340	anti-parallel
Strand 5	D	343	346	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	296	297	first strand
Strand 2	D	382	383	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	494	495	first strand
Strand 2	D	387	395	anti-parallel
Strand 3	D	464	472	anti-parallel
Strand 4	D	417	421	anti-parallel
Strand 5	D	562	570	anti-parallel
Strand 6	D	574	584	anti-parallel
Strand 7	D	523	533	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	105	first strand
Strand 2	A	111	113	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	176	first strand
Strand 2	A	208	211	anti-parallel
Strand 3	A	255	259	parallel
Strand 4	A	231	235	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	270	first strand
Strand 2	A	275	279	anti-parallel
Strand 3	A	373	380	anti-parallel
Strand 4	A	333	340	anti-parallel
Strand 5	A	343	346	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	297	first strand
Strand 2	A	382	383	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	495	first strand
Strand 2	A	387	395	anti-parallel
Strand 3	A	464	472	anti-parallel
Strand 4	A	417	421	anti-parallel
Strand 5	A	562	570	anti-parallel
Strand 6	A	574	584	anti-parallel
Strand 7	A	523	533	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	105	first strand
Strand 2	B	111	113	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	176	first strand
Strand 2	B	208	211	anti-parallel
Strand 3	B	255	259	parallel
Strand 4	B	231	235	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	270	first strand
Strand 2	B	275	279	anti-parallel
Strand 3	B	373	380	anti-parallel
Strand 4	B	333	340	anti-parallel
Strand 5	B	343	346	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	296	297	first strand
Strand 2	B	382	383	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	495	first strand
Strand 2	B	387	395	anti-parallel
Strand 3	B	464	472	anti-parallel
Strand 4	B	417	421	anti-parallel
Strand 5	B	562	570	anti-parallel
Strand 6	B	574	584	anti-parallel
Strand 7	B	523	533	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	105	first strand
Strand 2	C	111	113	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	176	first strand
Strand 2	C	208	211	anti-parallel
Strand 3	C	255	259	parallel
Strand 4	C	231	235	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	270	first strand
Strand 2	C	275	279	anti-parallel
Strand 3	C	373	380	anti-parallel
Strand 4	C	333	340	anti-parallel
Strand 5	C	343	346	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	296	297	first strand
Strand 2	C	382	383	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	495	first strand
Strand 2	C	387	395	anti-parallel
Strand 3	C	464	472	anti-parallel
Strand 4	C	417	421	anti-parallel
Strand 5	C	563	570	anti-parallel
Strand 6	C	574	584	anti-parallel
Strand 7	C	523	533	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6GOU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6GOU