Analysis of interatomic Contacts of Structural Units in PDB entry:
6GQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GQ0 entry

There is 1 chain in PDB entry 6GQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 47LEU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6GQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 79Right-handed alpha
Helix 2
AA2
A
91 105Right-handed alpha
Helix 3
AA3
A
116 129Right-handed alpha
Helix 4
AA4
A
153 169Right-handed alpha
Helix 5
AA5
A
184 199Right-handed alpha
Helix 6
AA6
A
215 230Right-handed alpha
Helix 7
AA7
A
242 254Right-handed alpha
Helix 8
AA8
A
256 260Right-handed 310
Helix 9
AA9
A
268 278Right-handed alpha
Helix 10
AB1
A
287 304Right-handed alpha
Helix 11
AB2
A
322 324Right-handed 310
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There are 2 sheets in PDB entry 6GQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
51 55parallel
Strand 3
A
109 112parallel
Strand 4
A
134 137parallel
Strand 5
A
148 152parallel
Strand 6
A
311 314parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 211first strand
Strand 2
A
173 179parallel
Strand 3
A
235 238parallel
Strand 4
A
261 265parallel
Strand 5
A
282 285parallel
Strand 6
A
317 320anti-parallel
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