Analysis of interatomic Contacts of Structural Units in PDB entry:
6GRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GRL entry

There is 1 chain in PDB entry 6GRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10THR 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6GRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
45 48Right-handed 310
Helix 3
AA3
A
49 56Right-handed alpha
Helix 4
AA4
A
62 68Right-handed alpha
Helix 5
AA5
A
79 89Right-handed alpha
Helix 6
AA6
A
106 120Right-handed alpha
Helix 7
AA7
A
132 136Right-handed 310
Helix 8
AA8
A
148 160Right-handed alpha
Helix 9
AA9
A
173 203Right-handed alpha
Helix 10
AB1
A
206 219Right-handed alpha
Helix 11
AB2
A
221 235Right-handed alpha
Helix 12
AB3
A
243 261Right-handed alpha
Helix 13
AB4
A
265 281Right-handed alpha
Helix 14
AB5
A
287 290Right-handed 310
Helix 15
AB6
A
291 296Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6GRL.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
39 42parallel
Strand 3
A
16 19parallel
Strand 4
A
72 75parallel
Strand 5
A
98 101parallel
Strand 6
A
123 130parallel
Strand 7
A
142 147anti-parallel
Strand 8
A
164 167parallel
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