Analysis of interatomic Contacts of Structural Units in PDB entry:
6GS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GS0 entry

There is 1 chain in PDB entry 6GS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 35ALA 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6GS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 57Right-handed alpha
Helix 2
AA2
A
57 70Right-handed alpha
Helix 3
AA3
A
94 96Right-handed 310
Helix 4
AA4
A
124 129Right-handed alpha
Helix 5
AA5
A
143 147Right-handed 310
Helix 6
AA6
A
173 177Right-handed 310
Helix 7
AA7
A
180 184Right-handed 310
Helix 8
AA8
A
185 192Right-handed alpha
Helix 9
AA9
A
202 204Right-handed 310
Helix 10
AB1
A
210 215Right-handed 310
Helix 11
AB2
A
216 221Right-handed alpha
Helix 12
AB3
A
234 251Right-handed alpha
Helix 13
AB4
A
267 280Right-handed alpha
Helix 14
AB5
A
298 302Right-handed 310
Helix 15
AB6
A
306 314Right-handed alpha
Helix 16
AB7
A
319 326Right-handed 310
Helix 17
AB8
A
328 332Right-handed 310
Helix 18
AB9
A
335 342Right-handed alpha
Helix 19
AC1
A
356 359Right-handed 310
Helix 20
AC2
A
360 378Right-handed alpha
Helix 21
AC3
A
411 426Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6GS0.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 93first strand
Strand 2
A
98 106anti-parallel
Strand 3
A
115 123anti-parallel
Strand 4
A
195 200anti-parallel
Strand 5
A
133 140parallel
Strand 6
A
256 266parallel
Strand 7
A
285 289parallel
Strand 8
A
348 353parallel
Strand 9
A
399 404parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il