Analysis of interatomic Contacts of Structural Units in PDB entry:
6GUI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GUI entry

There are 2 chains in PDB entry 6GUI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5SER 291
B
 PRO 5SER 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6GUI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
53 68Right-handed alpha
Helix 3
AA3
A
69 71Right-handed 310
Helix 4
AA4
A
93 101Right-handed alpha
Helix 5
AA5
A
114 125Right-handed alpha
Helix 6
AA6
A
125 134Right-handed alpha
Helix 7
AA7
A
148 161Right-handed alpha
Helix 8
AA8
A
176 181Right-handed alpha
Helix 9
AA9
A
181 192Right-handed alpha
Helix 10
AB1
A
221 236Right-handed alpha
Helix 11
AB2
A
236 249Right-handed alpha
Helix 12
AB3
A
269 285Right-handed alpha
Helix 13
AB4
B
38 42Right-handed 310
Helix 14
AB5
B
53 68Right-handed alpha
Helix 15
AB6
B
69 71Right-handed 310
Helix 16
AB7
B
93 101Right-handed alpha
Helix 17
AB8
B
114 125Right-handed alpha
Helix 18
AB9
B
125 134Right-handed alpha
Helix 19
AC1
B
148 161Right-handed alpha
Helix 20
AC2
B
162 165Right-handed 310
Helix 21
AC3
B
174 177Right-handed 310
Helix 22
AC4
B
178 192Right-handed alpha
Helix 23
AC5
B
221 236Right-handed alpha
Helix 24
AC6
B
236 249Right-handed alpha
Helix 25
AC7
B
269 285Right-handed alpha
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There are 2 sheets in PDB entry 6GUI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 19first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
44 52parallel
Strand 5
A
137 147parallel
Strand 6
A
167 171parallel
Strand 7
A
202 208parallel
Strand 8
A
256 262parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 19first strand
Strand 2
B
25 31anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
44 52parallel
Strand 5
B
137 147parallel
Strand 6
B
167 171parallel
Strand 7
B
202 208parallel
Strand 8
B
256 262parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il