Analysis of interatomic Contacts of Structural Units in PDB entry:
6GUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GUO entry

There are 4 chains in PDB entry 6GUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ALA 303
B
 THR 2ALA 303
C
 THR 2ALA 303
D
 SER 1ALA 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6GUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 77Right-handed alpha
Helix 2
AA2
A
100 106Right-handed alpha
Helix 3
AA3
A
129 140Right-handed alpha
Helix 4
AA4
A
140 148Right-handed alpha
Helix 5
AA5
A
164 177Right-handed alpha
Helix 6
AA6
A
192 197Right-handed alpha
Helix 7
AA7
A
197 208Right-handed alpha
Helix 8
AA8
A
237 252Right-handed alpha
Helix 9
AA9
A
252 268Right-handed alpha
Helix 10
AB1
A
286 301Right-handed alpha
Helix 11
AB2
B
58 77Right-handed alpha
Helix 12
AB3
B
100 106Right-handed alpha
Helix 13
AB4
B
129 140Right-handed alpha
Helix 14
AB5
B
140 148Right-handed alpha
Helix 15
AB6
B
164 177Right-handed alpha
Helix 16
AB7
B
178 181Right-handed 310
Helix 17
AB8
B
192 197Right-handed alpha
Helix 18
AB9
B
197 208Right-handed alpha
Helix 19
AC1
B
237 252Right-handed alpha
Helix 20
AC2
B
252 268Right-handed alpha
Helix 21
AC3
B
286 302Right-handed alpha
Helix 22
AC4
C
58 77Right-handed alpha
Helix 23
AC5
C
100 106Right-handed alpha
Helix 24
AC6
C
129 140Right-handed alpha
Helix 25
AC7
C
140 148Right-handed alpha
Helix 26
AC8
C
164 177Right-handed alpha
Helix 27
AC9
C
178 181Right-handed 310
Helix 28
AD1
C
192 197Right-handed alpha
Helix 29
AD2
C
197 208Right-handed alpha
Helix 30
AD3
C
237 252Right-handed alpha
Helix 31
AD4
C
252 268Right-handed alpha
Helix 32
AD5
C
286 301Right-handed alpha
Helix 33
AD6
D
58 77Right-handed alpha
Helix 34
AD7
D
100 106Right-handed alpha
Helix 35
AD8
D
129 140Right-handed alpha
Helix 36
AD9
D
140 148Right-handed alpha
Helix 37
AE1
D
164 177Right-handed alpha
Helix 38
AE2
D
178 181Right-handed 310
Helix 39
AE3
D
192 197Right-handed alpha
Helix 40
AE4
D
197 208Right-handed alpha
Helix 41
AE5
D
237 252Right-handed alpha
Helix 42
AE6
D
252 268Right-handed alpha
Helix 43
AE7
D
286 302Right-handed alpha
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There are 4 sheets in PDB entry 6GUO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
B
17 23anti-parallel
Strand 3
B
30 35anti-parallel
Strand 4
B
82 89anti-parallel
Strand 5
B
51 57parallel
Strand 6
B
155 163parallel
Strand 7
B
183 187parallel
Strand 8
B
218 224parallel
Strand 9
B
272 278parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 278first strand
Strand 2
A
218 224parallel
Strand 3
A
183 187parallel
Strand 4
A
155 163parallel
Strand 5
A
51 57parallel
Strand 6
A
82 89parallel
Strand 7
A
30 35anti-parallel
Strand 8
A
17 23anti-parallel
Strand 9
B
5 9anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 22first strand
Strand 2
C
30 35anti-parallel
Strand 3
C
82 89anti-parallel
Strand 4
C
51 57parallel
Strand 5
C
155 163parallel
Strand 6
C
183 187parallel
Strand 7
C
218 224parallel
Strand 8
C
272 278parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 22first strand
Strand 2
D
30 35anti-parallel
Strand 3
D
82 89anti-parallel
Strand 4
D
51 57parallel
Strand 5
D
155 163parallel
Strand 6
D
183 187parallel
Strand 7
D
218 224parallel
Strand 8
D
272 278parallel
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