Analysis of interatomic Contacts of Structural Units in PDB entry:
6GW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6GW5 entry

There are 2 chains in PDB entry 6GW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 23SER 438
B
 ASN 22ASN 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6GW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 54Right-handed alpha
Helix 2
AA2
A
55 76Right-handed alpha
Helix 3
AA3
A
80 101Right-handed alpha
Helix 4
AA4
A
126 133Right-handed alpha
Helix 5
AA5
A
143 161Right-handed alpha
Helix 6
AA6
A
187 205Right-handed alpha
Helix 7
AA7
A
212 214Right-handed 310
Helix 8
AA8
A
231 234Right-handed 310
Helix 9
AA9
A
235 262Right-handed alpha
Helix 10
AB1
A
263 265Right-handed 310
Helix 11
AB2
A
276 305Right-handed alpha
Helix 12
AB3
A
307 315Right-handed alpha
Helix 13
AB4
A
316 320Right-handed 310
Helix 14
AB5
A
337 368Right-handed alpha
Helix 15
AB6
A
368 392Right-handed alpha
Helix 16
AB7
A
423 437Right-handed alpha
Helix 17
AB8
B
23 54Right-handed alpha
Helix 18
AB9
B
55 76Right-handed alpha
Helix 19
AC1
B
80 101Right-handed alpha
Helix 20
AC2
B
126 133Right-handed alpha
Helix 21
AC3
B
143 160Right-handed alpha
Helix 22
AC4
B
187 205Right-handed alpha
Helix 23
AC5
B
212 214Right-handed 310
Helix 24
AC6
B
231 234Right-handed 310
Helix 25
AC7
B
235 262Right-handed alpha
Helix 26
AC8
B
263 265Right-handed 310
Helix 27
AC9
B
276 305Right-handed alpha
Helix 28
AD1
B
307 316Right-handed alpha
Helix 29
AD2
B
317 320Right-handed 310
Helix 30
AD3
B
337 368Right-handed alpha
Helix 31
AD4
B
368 392Right-handed alpha
Helix 32
AD5
B
423 438Right-handed alpha
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There are 7 sheets in PDB entry 6GW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
140 142parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
229 230anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 405first strand
Strand 2
A
421 422anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 110first strand
Strand 2
B
140 142parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 162first strand
Strand 2
B
167 168anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
229 230anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
404 405first strand
Strand 2
B
421 422anti-parallel
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