Analysis of interatomic Contacts of Structural Units in PDB entry:
6GWI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6GWI entry

There are 2 chains in PDB entry 6GWI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 2	THR 450
B	MET 1	ILE 208

There are 40 helices in PDB entry 6GWI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	21	28	Right-handed alpha
Helix 3	AA3	A	52	57	Right-handed alpha
Helix 4	AA4	A	64	78	Right-handed alpha
Helix 5	AA5	A	89	103	Right-handed alpha
Helix 6	AA6	A	115	134	Right-handed alpha
Helix 7	AA7	A	153	160	Right-handed alpha
Helix 8	AA8	A	162	167	Right-handed alpha
Helix 9	AA9	A	183	188	Right-handed alpha
Helix 10	AB1	A	192	212	Right-handed alpha
Helix 11	AB2	A	236	248	Right-handed alpha
Helix 12	AB3	A	268	273	Right-handed alpha
Helix 13	AB4	A	283	288	Right-handed 310
Helix 14	AB5	A	300	311	Right-handed alpha
Helix 15	AB6	A	322	339	Right-handed alpha
Helix 16	AB7	A	340	348	Right-handed alpha
Helix 17	AB8	A	348	359	Right-handed alpha
Helix 18	AB9	A	391	394	Right-handed 310
Helix 19	AC1	A	395	407	Right-handed alpha
Helix 20	AC2	A	427	450	Right-handed alpha
Helix 21	AC3	B	2	13	Right-handed alpha
Helix 22	AC4	B	21	28	Right-handed alpha
Helix 23	AC5	B	52	57	Right-handed alpha
Helix 24	AC6	B	64	78	Right-handed alpha
Helix 25	AC7	B	89	103	Right-handed alpha
Helix 26	AC8	B	115	134	Right-handed alpha
Helix 27	AC9	B	153	160	Right-handed alpha
Helix 28	AD1	B	162	167	Right-handed alpha
Helix 29	AD2	B	183	188	Right-handed alpha
Helix 30	AD3	B	192	212	Right-handed alpha
Helix 31	AD4	B	236	248	Right-handed alpha
Helix 32	AD5	B	268	273	Right-handed alpha
Helix 33	AD6	B	283	288	Right-handed 310
Helix 34	AD7	B	300	311	Right-handed alpha
Helix 35	AD8	B	322	339	Right-handed alpha
Helix 36	AD9	B	340	348	Right-handed alpha
Helix 37	AE1	B	348	359	Right-handed alpha
Helix 38	AE2	B	391	394	Right-handed 310
Helix 39	AE3	B	395	407	Right-handed alpha
Helix 40	AE4	B	427	450	Right-handed alpha

There are 10 sheets in PDB entry 6GWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	B	107	113	parallel
Strand 3	B	294	299	anti-parallel
Strand 4	B	279	282	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	B	312	313	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	39	42	anti-parallel
Strand 3	A	30	36	anti-parallel
Strand 4	B	87	88	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	B	30	36	parallel
Strand 3	B	39	42	anti-parallel
Strand 4	B	47	49	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	282	first strand
Strand 2	A	294	299	anti-parallel
Strand 3	A	107	113	anti-parallel
Strand 4	B	14	15	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	179	first strand
Strand 2	A	141	145	parallel
Strand 3	A	216	221	parallel
Strand 4	A	251	254	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	313	first strand
Strand 2	B	19	20	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	372	first strand
Strand 2	A	375	380	anti-parallel
Strand 3	A	417	420	anti-parallel
Strand 4	A	412	414	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	179	first strand
Strand 2	B	141	145	parallel
Strand 3	B	216	221	parallel
Strand 4	B	251	254	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	372	first strand
Strand 2	B	375	380	anti-parallel
Strand 3	B	417	420	anti-parallel
Strand 4	B	412	414	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6GWI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6GWI