Analysis of interatomic Contacts of Structural Units in PDB entry:
6GX7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6GX7 entry

There are 4 chains in PDB entry 6GX7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 2	VAL 437
B	MET 1	ALA 440
C	ARG 2	VAL 437
D	MET 1	GLY 17

There are145 helices in PDB entry 6GX7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	29	Right-handed alpha
Helix 2	AA2	A	47	51	Right-handed 310
Helix 3	AA3	A	72	80	Right-handed alpha
Helix 4	AA4	A	88	90	Right-handed 310
Helix 5	AA5	A	102	108	Right-handed alpha
Helix 6	AA6	A	110	127	Right-handed alpha
Helix 7	AA7	A	143	161	Right-handed alpha
Helix 8	AA8	A	182	195	Right-handed alpha
Helix 9	AA9	A	196	198	Right-handed 310
Helix 10	AB1	A	206	216	Right-handed alpha
Helix 11	AB2	A	223	244	Right-handed alpha
Helix 12	AB3	A	251	260	Right-handed alpha
Helix 13	AB4	A	287	295	Right-handed alpha
Helix 14	AB5	A	296	301	Right-handed 310
Helix 15	AB6	A	306	310	Right-handed 310
Helix 16	AB7	A	324	339	Right-handed alpha
Helix 17	AB8	A	384	400	Right-handed alpha
Helix 18	AB9	A	404	411	Right-handed alpha
Helix 19	AC1	A	415	436	Right-handed alpha
Helix 20	AC2	B	10	28	Right-handed alpha
Helix 21	AC3	B	41	48	Right-handed alpha
Helix 22	AC4	B	49	51	Right-handed 310
Helix 23	AC5	B	72	80	Right-handed alpha
Helix 24	AC6	B	88	90	Right-handed 310
Helix 25	AC7	B	102	108	Right-handed alpha
Helix 26	AC8	B	109	128	Right-handed alpha
Helix 27	AC9	B	144	161	Right-handed alpha
Helix 28	AD1	B	182	198	Right-handed alpha
Helix 29	AD2	B	206	215	Right-handed alpha
Helix 30	AD3	B	223	239	Right-handed alpha
Helix 31	AD4	B	239	244	Right-handed alpha
Helix 32	AD5	B	251	260	Right-handed alpha
Helix 33	AD6	B	287	297	Right-handed alpha
Helix 34	AD7	B	298	301	Right-handed 310
Helix 35	AD8	B	306	310	Right-handed 310
Helix 36	AD9	B	324	338	Right-handed alpha
Helix 37	AE1	B	339	343	Right-handed 310
Helix 38	AE2	B	384	401	Right-handed alpha
Helix 39	AE3	B	404	411	Right-handed alpha
Helix 40	AE4	B	415	438	Right-handed alpha
Helix 41	AE5	C	10	29	Right-handed alpha
Helix 42	AE6	C	47	51	Right-handed 310
Helix 43	AE7	C	72	81	Right-handed alpha
Helix 44	AE8	C	88	90	Right-handed 310
Helix 45	AE9	C	102	108	Right-handed alpha
Helix 46	AF1	C	110	127	Right-handed alpha
Helix 47	AF2	C	143	161	Right-handed alpha
Helix 48	AF3	C	182	195	Right-handed alpha
Helix 49	AF4	C	196	198	Right-handed 310
Helix 50	AF5	C	206	216	Right-handed alpha
Helix 51	AF6	C	223	244	Right-handed alpha
Helix 52	AF7	C	251	260	Right-handed alpha
Helix 53	AF8	C	287	295	Right-handed alpha
Helix 54	AF9	C	296	301	Right-handed 310
Helix 55	AG1	C	306	310	Right-handed 310
Helix 56	AG2	C	324	339	Right-handed alpha
Helix 57	AG3	C	384	401	Right-handed alpha
Helix 58	AG4	C	404	410	Right-handed alpha
Helix 59	AG5	C	414	436	Right-handed alpha
Helix 60	AG6	D	10	28	Right-handed alpha
Helix 61	AG7	D	41	48	Right-handed alpha
Helix 62	AG8	D	49	51	Right-handed 310
Helix 63	AG9	D	72	80	Right-handed alpha
Helix 64	AH1	D	88	90	Right-handed 310
Helix 65	AH2	D	102	108	Right-handed alpha
Helix 66	AH3	D	109	128	Right-handed alpha
Helix 67	AH4	D	144	161	Right-handed alpha
Helix 68	AH5	D	182	198	Right-handed alpha
Helix 69	AH6	D	206	215	Right-handed alpha
Helix 70	AH7	D	223	239	Right-handed alpha
Helix 71	AH8	D	239	244	Right-handed alpha
Helix 72	AH9	D	251	260	Right-handed alpha
Helix 73	AI1	D	287	297	Right-handed alpha
Helix 74	AI2	D	298	301	Right-handed 310
Helix 75	AI3	D	306	310	Right-handed 310
Helix 76	AI4	D	324	339	Right-handed alpha
Helix 77	AI5	D	340	343	Right-handed 310
Helix 78	AI6	D	384	401	Right-handed alpha
Helix 79	AI7	D	404	411	Right-handed alpha
Helix 80	AI8	D	414	438	Right-handed alpha
Helix 81	AI9	E	13	23	Right-handed alpha
Helix 82	AJ1	E	27	42	Right-handed alpha
Helix 83	AJ2	E	43	45	Right-handed 310
Helix 84	AJ3	E	46	54	Right-handed alpha
Helix 85	AJ4	E	58	73	Right-handed alpha
Helix 86	AJ5	E	74	76	Right-handed 310
Helix 87	AJ6	E	77	85	Right-handed alpha
Helix 88	AJ7	E	89	104	Right-handed alpha
Helix 89	AJ8	E	105	107	Right-handed 310
Helix 90	AJ9	E	108	116	Right-handed alpha
Helix 91	AK1	E	120	135	Right-handed alpha
Helix 92	AK2	E	136	138	Right-handed 310
Helix 93	AK3	E	139	146	Right-handed alpha
Helix 94	AK4	E	147	149	Right-handed 310
Helix 95	AK5	E	151	166	Right-handed alpha
Helix 96	AK6	E	167	181	Right-handed alpha
Helix 97	AK7	E	182	195	Right-handed alpha
Helix 98	AK8	F	13	23	Right-handed alpha
Helix 99	AK9	F	27	42	Right-handed alpha
Helix 100	AL1	F	43	45	Right-handed 310
Helix 101	AL2	F	46	54	Right-handed alpha
Helix 102	AL3	F	58	73	Right-handed alpha
Helix 103	AL4	F	74	76	Right-handed 310
Helix 104	AL5	F	77	85	Right-handed alpha
Helix 105	AL6	F	89	104	Right-handed alpha
Helix 106	AL7	F	105	107	Right-handed 310
Helix 107	AL8	F	108	116	Right-handed alpha
Helix 108	AL9	F	120	135	Right-handed alpha
Helix 109	AM1	F	136	138	Right-handed 310
Helix 110	AM2	F	139	147	Right-handed alpha
Helix 111	AM3	F	151	166	Right-handed alpha
Helix 112	AM4	F	167	181	Right-handed alpha
Helix 113	AM5	F	183	195	Right-handed alpha
Helix 114	AM6	G	95	102	Right-handed alpha
Helix 115	AM7	G	108	119	Right-handed alpha
Helix 116	AM8	G	124	136	Right-handed alpha
Helix 117	AM9	G	138	153	Right-handed alpha
Helix 118	AN1	G	157	176	Right-handed alpha
Helix 119	AN2	G	176	185	Right-handed alpha
Helix 120	AN3	G	185	197	Right-handed alpha
Helix 121	AN4	G	199	212	Right-handed alpha
Helix 122	AN5	G	216	226	Right-handed alpha
Helix 123	AN6	G	229	247	Right-handed alpha
Helix 124	AN7	G	256	294	Right-handed alpha
Helix 125	AN8	G	303	317	Right-handed alpha
Helix 126	AN9	G	321	334	Right-handed alpha
Helix 127	AO1	G	336	354	Right-handed alpha
Helix 128	AO2	G	355	359	Right-handed 310
Helix 129	AO3	G	361	379	Right-handed alpha
Helix 130	AO4	H	95	102	Right-handed alpha
Helix 131	AO5	H	108	119	Right-handed alpha
Helix 132	AO6	H	124	136	Right-handed alpha
Helix 133	AO7	H	138	153	Right-handed alpha
Helix 134	AO8	H	157	176	Right-handed alpha
Helix 135	AO9	H	176	185	Right-handed alpha
Helix 136	AP1	H	185	197	Right-handed alpha
Helix 137	AP2	H	199	211	Right-handed alpha
Helix 138	AP3	H	216	226	Right-handed alpha
Helix 139	AP4	H	229	251	Right-handed alpha
Helix 140	AP5	H	256	294	Right-handed alpha
Helix 141	AP6	H	303	317	Right-handed alpha
Helix 142	AP7	H	321	334	Right-handed alpha
Helix 143	AP8	H	336	354	Right-handed alpha
Helix 144	AP9	H	355	359	Right-handed 310
Helix 145	AQ1	H	361	381	Right-handed alpha

There are 10 sheets in PDB entry 6GX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	4	9	parallel
Strand 4	A	134	140	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	273	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	312	321	anti-parallel
Strand 4	A	352	356	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	65	69	parallel
Strand 3	B	3	9	parallel
Strand 4	B	132	140	parallel
Strand 5	B	165	172	parallel
Strand 6	B	200	205	parallel
Strand 7	B	267	273	parallel
Strand 8	B	373	381	anti-parallel
Strand 9	B	312	321	anti-parallel
Strand 10	B	351	356	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	61	63	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	65	69	parallel
Strand 3	C	4	9	parallel
Strand 4	C	134	140	parallel
Strand 5	C	165	172	parallel
Strand 6	C	200	205	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	61	63	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	273	first strand
Strand 2	C	373	381	anti-parallel
Strand 3	C	312	321	anti-parallel
Strand 4	C	352	356	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	65	69	parallel
Strand 3	D	4	9	parallel
Strand 4	D	134	140	parallel
Strand 5	D	165	172	parallel
Strand 6	D	200	205	parallel
Strand 7	D	267	273	parallel
Strand 8	D	373	381	anti-parallel
Strand 9	D	312	321	anti-parallel
Strand 10	D	351	356	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	60	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6GX7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6GX7